Query= MSMg01no321_f19.b1 MSMg01no321_f19.b1 CHROMAT_FILE:
MSMg01no321_f19.b1 PHD_FILE: MSMg01no321_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:05 2005
(343 letters)
>mm_chr8_90534903_90535645
Length = 743
Score = 613 bits (317), Expect = e-180
Identities = 335/341 (98%)
Strand = Plus / Plus
Query: 1 ggcctctaactcagagatccacctgcctctgcctccagagtgctgggattaaaggcgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcctctaactcagagatccacctgcctctgcctccagagtgctgggattaaaggcgtgc 260
Query: 61 gccacaaccaccaggtcacattcagttcttaactgttctctgtaacagcgtggctccaga 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccacaaccaccaggtcacatttagttcttaactgttctctgtaacagcgtggctccaga 320
Query: 121 gaggatggcacgggacctagagatgtcgtaccctccctccaagctccctagcacctactt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 321 gaggatggcacgggacctagagatgtcgtaccctctctccaagctccctagcacccactt 380
Query: 181 cagaaagacaacatggaggaggaggggttagagaaaaggctgtatatcccagctcattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaaagacaacatggaggaggaggggttagagaaaaggctgtatatcccagctcattca 440
Query: 241 gggctttgcttgttattcagtgatgtgatggagtccattgcactcagtcccagcacagcc 300
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggctttgcatggcattcagtgatgtgatggagtccattgcactcagtcccagcacagcc 500
Query: 301 actgtcacgtgactaccacaatggccatcggtcactcccaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgtcacgtgactaccacaatggccatcggtcactcccaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_f19.g1 MSMg01no321_f19.g1 CHROMAT_FILE:
MSMg01no321_f19.g1 PHD_FILE: MSMg01no321_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:05 2005
(292 letters)
>mm_chr8_90713398_90714089
Length = 692
Score = 505 bits (261), Expect = e-147
Identities = 285/293 (97%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 1 cccccctcctacccaggtgggaggttggatgcttgaccaccagggtgacggggaagaggc 60
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 652 cccccctcctacccaggtggcaggttggatgcttgaccaccagggtgaaggggaagaggc 593
Query: 61 ttacccaggagaacacagtgaagacatccatcagaatgttggactcacacagacatacgg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttccccaggagaacacagtgaagacatccatcagaatgttggactcacacagacatacgg 533
Query: 121 tattggctggtcgaccgtgtt-ttcttagaagtgaaatacgagggactgccatgttctgc 179
||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 532 tatcggctggtcgaccgtgttgttcttagaagtgaaatatgagggactgccatgttctgc 473
Query: 180 acagctctgggcatttcttgtctgggactgcaagagagtgaagaaaagatggacacggga 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 472 acagctctgggcatttcttgtctgggactgcgagagagtgaagaaaagatggacacggga 413
Query: 240 ggaagtaagtctcctttagggtacacacaggggacattgggataggattgcct 292
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ggaagtaagtcccctttagggtacacacaggggacattgggataggattgcct 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
