TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTACAGCCTTGCCAATCCACAGCAGAGGCTAACCACCTCTCTATTGC
TGCAACCCTTTAATACAGTTCCTCATACAAGTATTTCTGTTGCTACTTCA
TAACTGTAATTCTGCTGTTATGAGTCAGAATATAATATCTGTGTTTTCCA
ATGGTCTTAAGTGACCCCATTGAAAGGGCCATTGTACCCACAAAGGGGGT
CCCAACCCACATATTGGGAACTGCTGTTCTAGAAGACAGATGTCACAGCG
CTTTTCCCGTCCTGACTCATTCTTTCCACTGCCTCTTCTATGATGTTCCC
TGAGCCTGTGATCTGTTGTTGCCGCTTAAAGATTTATTTATTTATTTACT
TATTATATGTAAGTACACTGTAGCTGTCTTTAGACATCTCAGAAGAGGGC
ATCAGATCTCATTAGGGATGGTTGTAAGTCATCATGTGGTTGCTGGGATT
TGAACTCACGACCTTCGGAAGAGCAGTCAGCACTCTTAACCGCTGAGCCA
TCTCTCCAGCCCCCTATTCTTATTTTTAATTAACTGAATTTTAATTAAAA
TTTTCTATTTATTTTTTTCAAAACAGGGTTTCCTCTGTGTAGCTCTGGCT
GTCCTGGAACTTACTATGTAGGTTAAGCTGGCCTCGACCTCACAGAGCTT
GGCCTGCCGAGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGAAGGGAAGGGCTGTGAGGAAGA
AAAGCCTGCTCGTCTTGTTTCTGGGAATGGAGCATGAAGGAAAGAATGTC
TGTTATGCTTACGACCTGTGAGGCTTTGAGCAGGCACATGAAAAATATAA
ACACTCTCCGACTTAATAATGACAGCCTCTTATCCTCCAAAGACTTCAAA
GTCTTTTCCTATATATTATCTCACTTATCTTCTCAGCATCCCTCCAAAGC
AGCAAGACGTATAATTATCCCCAAGTTTCAGACGGGAAAGGGGAAGGGGA
GAACTCGAGCATCTATTGCTTGTAGTGCTAACAGGAACCAGCCTGGTAAA
ATCCCAGATGCAAATACTCAGATAAACCTTAATATGGTACCTCCGTGTTC
TTACACGCACGTTCGCGTGTCTAGCCATTTTTCTGCAAAACTTGTCTTTC
CTCTCATTGTCAGGACGCTGGTAAAGGAGAGCAGTATTTAGCCAGTTGTT
CAGACTAGAAACCTAGAAGCCATCCTTGATTTCTTCCCTTCTCTTCCTCC
CTCTTTCCTACCATCTTTTCCACAAACATATTTTAATGTCTATCTACAGC
CTTTTGCCTTCTGCTATGGCTTGGATGTGGGAGCTCCCTCCAAAACTCAT
GTTCAGGTTTGGTCCT

Query= MSMg01no322_n24.g1 MSMg01no322_n24.g1 CHROMAT_FILE:
MSMg01no322_n24.g1 PHD_FILE: MSMg01no322_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:56 2005
         (640 letters)



>mm_chr8_63699574_63700613
          Length = 1040

 Score = 1183 bits (612), Expect = 0.0
 Identities = 633/644 (98%), Gaps = 8/644 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaagggaagggctgtgaggaagaaaagcctgctcgtcttgtttctgggaatggagcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 agaagggaagggctgtgaggaagaaaagcctgctcgtcttgtttctgggaatggagcatg 869

                                                                       
Query: 61  aaggaaagaatgtctgttatgcttacgacctgtgaggctttgagcaggcacatgaaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 868 aaggaaagaatgtctgttatgcttacgacctgtgaggctttgagcagacacatgaaaaat 809

                                                                       
Query: 121 ataaacactctccgacttaataatgacagcctcttatcctccaaagacttcaaagtcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ataaacactctccgacttaataatgacagcctcttatcctccaaagacttcaaagtcttt 749

                                                                       
Query: 181 tcctatatattatctcacttatcttctcagcatccctccaaagcagcaagacgtataatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tcctatatattatctcacttatcttctcagcatccctccaaagcagcaagacgtataatt 689

                                                                       
Query: 241 atccccaagtttcagacgggaaaggggaaggggagaactcgagcatctattgcttgtagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atccccaagtttcagacgggaaaggggaaggggagaactcgagcatctattgcttgtagt 629

                                                                       
Query: 301 gctaacaggaaccagcctggtaaaatcccagatgcaaatactcagataaaccttaatatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gctaacaggaaccagcctggtaaaatcccagatgcaaatactcagataaaccttaatatg 569

                                                                       
Query: 361 gtacctccgtgttcttacacgcacgttcgcgtgtctagccatttttctgcaaaacttgtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtacctccgtgttcttacacgcacgttcgcgtgtctagccatttttctgcaaaacttgtc 509

                                                                       
Query: 421 tttcctctcattgtcaggacgctggtaaaggagagcagtatttagccagttgttcagact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttcctctcattgtcaggacgctggtaaaggagagcagtatttagccagttgttcagact 449

                                                                       
Query: 481 agaaacctagaagccatccttgatttcttcccttctcttcctccctctttcctaccatct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 448 agaaacctagaagccatccttgatttcttcccttctcttcctccctctttcctaccacct 389

                                                                       
Query: 541 tttccacaaacatattttaatgtctatctacagccttttgccttctgctatggcttgg-- 598
           ||| ||||||||||||||||||||||||||||||||||||||||||    ||||||||  
Sbjct: 388 tttacacaaacatattttaatgtctatctacagccttttgccttct----tggcttggca 333

                                                       
Query: 599 --atgtgggagctccctccaaaactcatgttcaggtttggtcct 640
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaatgtgggagctccctccaaaactcatgttcaggtttggtcct 289


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)