Query= MSMg01no324_d10.b1 MSMg01no324_d10.b1 CHROMAT_FILE:
MSMg01no324_d10.b1 PHD_FILE: MSMg01no324_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:28 2005
(525 letters)
>mm_chr8_44260621_44261545
Length = 925
Score = 978 bits (506), Expect = 0.0
Identities = 519/526 (98%), Gaps = 6/526 (1%)
Strand = Plus / Plus
Query: 3 gaattcattcaaaggtttcc---ttaatcaaaaaatggaatctgaaagcaaaatggagtt 59
||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcattcaaaggg---caagttaatcaaaaaatggaatctgaaagcaaaatggagtt 259
Query: 60 tgtaatgttaagctgggcccttcattgatattttatgtgaggggggatctattttcaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtaatgttaagctgggcccttcattgatattttatgtgaggggggatctattttcaata 319
Query: 120 aatggaaaaacaaaacctctgcaccttatctcagtgtggtggtggtgcacacctttaatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatggaaaaacaaaacctctgcaccttatctcagtgtggtggtggtgcacacctttaatc 379
Query: 180 ccatcactcgggagaggcagaggcaggcagatctctatgagtttgaggtcagcttggtct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccatcactcgggagaggcagaggcaggcagatctctatgagtttgaggtcagcttggtct 439
Query: 240 acatagcaagttcaaggtcagcaaatggtacatagatcctgtcaaaacacaaaacaaatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acatagcaagttcaaggtcagcaaatggtacatagatcctgtcaaaacacaaaacaaatc 499
Query: 300 cacccacccagacaaacaaaatcttttcttgagagtataaaagggacagaattattttta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cacccacccagacaaacaaaatcttttcttgagagtataaaagggacagaattattttta 559
Query: 360 agttttagaatctgaaaaatctaagttgaggctgatatccttgtacaaagccgagtctta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agttttagaatctgaaaaatctaagttgaggctgatatccttgtacaaagccgagtctta 619
Query: 420 gaaagcaggcacttgtcaggctagtttagggcagcagattagggtggagtttcgttttgt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaaagcaggcacttgtcaggctagtttagggcagcagattagggtggagtttcgttttgt 679
Query: 480 ttcgagacaggctttcactctgtagccttaataaggcctaaattgg 525
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttcgagacaggctttcactctgtagccttaataaggcctaaattgg 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_d10.g1 MSMg01no324_d10.g1 CHROMAT_FILE:
MSMg01no324_d10.g1 PHD_FILE: MSMg01no324_d10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:28 2005
(521 letters)
>mm_chr8_44449604_44450524
Length = 921
Score = 656 bits (339), Expect = 0.0
Identities = 339/339 (100%)
Strand = Plus / Minus
Query: 183 cacctgaaaacgtcaggcatggtggtgtagacctggaatcccagcactggagaggcagga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921 cacctgaaaacgtcaggcatggtggtgtagacctggaatcccagcactggagaggcagga 862
Query: 243 gcaggaagatctctggggcttcaagatgctccctgcagattcaatgagaggcagtatctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 gcaggaagatctctggggcttcaagatgctccctgcagattcaatgagaggcagtatctc 802
Query: 303 caaaagcaaggtggagtattactccttaggaagattcccaatgttgccatctaccttctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caaaagcaaggtggagtattactccttaggaagattcccaatgttgccatctaccttctg 742
Query: 363 ggcacacatacatacaaacatgagcatgcgcatacaagattcacacaccaaaagactaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggcacacatacatacaaacatgagcatgcgcatacaagattcacacaccaaaagactaat 682
Query: 423 taatcagtgagttgactgattgattcattttaaaaagaaaatctagagtctcggagaacc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatcagtgagttgactgattgattcattttaaaaagaaaatctagagtctcggagaacc 622
Query: 483 cccatgactcacattccccacttattaaaaagggtccag 521
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccatgactcacattccccacttattaaaaagggtccag 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
