Query= MSMg01no324_p07.b1 MSMg01no324_p07.b1 CHROMAT_FILE:
MSMg01no324_p07.b1 PHD_FILE: MSMg01no324_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:24 2005
(575 letters)
>mm_chr8_101356698_101357672
Length = 975
Score = 1083 bits (560), Expect = 0.0
Identities = 569/572 (99%)
Strand = Plus / Plus
Query: 4 ggaattctagaaatctacccgtccttgcctcttcagtattactatagacatatactgttt 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagaaatctacctgtccttgcctcttcagtattactatagacatatactgttt 263
Query: 64 tgtattgctatttttatgtaggtgttgggtacctgaccagatttctttatttttgcatgg 123
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtattcctatttttatgtaggtgttgggtacctgaccagatttctttatttttgcatgg 323
Query: 124 ccatcatttaccgaatgaaccatttctacagcccttttgaaagtatgtacgtatttatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 ccatcatttaccgaatgaaccatttctacagcccttttgaaagtatgtatgtatttatgt 383
Query: 184 atgtatgtttgtatgtatctgtcttctatttatctatctatcataaattttattctaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atgtatgtttgtatgtatctgtcttctatttatctatctatcataaattttattctaaag 443
Query: 244 aaatcctctaatataatttcatgctttaaattgacttacagacctataatgaaaaacatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatcctctaatataatttcatgctttaaattgacttacagacctataatgaaaaacatg 503
Query: 304 tccatattatcaataatgatgtcaatattaatgaaaaaataattctccaatgaagattca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tccatattatcaataatgatgtcaatattaatgaaaaaataattctccaatgaagattca 563
Query: 364 cttgatagttatgtaaacatctagaaaagggttctcttattcagtcgtaattgggtggta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cttgatagttatgtaaacatctagaaaagggttctcttattcagtcgtaattgggtggta 623
Query: 424 ttaattgatacctgtgaaaaattagtgcttttaaagattttcatctatgaaatcaaagtc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttaattgatacctgtgaaaaattagtgcttttaaagattttcatctatgaaatcaaagtc 683
Query: 484 cttgaatacagtacagcaaacacttcagagacttcaaggaaattatgttggatgaatact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cttgaatacagtacagcaaacacttcagagacttcaaggaaattatgttggatgaatact 743
Query: 544 aagatggaaaagtataaaaaactttattgaca 575
||||||||||||||||||||||||||||||||
Sbjct: 744 aagatggaaaagtataaaaaactttattgaca 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space: 545225
Effective search space used: 545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_p07.g1 MSMg01no324_p07.g1 CHROMAT_FILE:
MSMg01no324_p07.g1 PHD_FILE: MSMg01no324_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:24 2005
(523 letters)
>mm_chr8_101525391_101526326
Length = 936
Score = 799 bits (413), Expect = 0.0
Identities = 500/537 (93%), Gaps = 15/537 (2%)
Strand = Plus / Minus
Query: 1 actctatggaattcacagggcagaaggagggaacagactcctagacgtggtcgtcttacc 60
|||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 736 actctatggaattcacagggcagaaggagggaacagtctcctagacatggttgtcttacc 677
Query: 61 ttcaaatgcacatgaccttgtgaatgcacctacacccatg--------cacacatacaca 112
||||||||||||||||||||||||||| |||| ||||||| ||||||||||||
Sbjct: 676 ttcaaatgcacatgaccttgtgaatgcgcctatacccatgcacacatacacacatacaca 617
Query: 113 cataacaaacaaatatataagtaagacagtttggggggagtataagatctggagccaaat 172
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 616 cataacaaacaaatatataagtaagacagttaggggggagtataagatctggagccaaat 557
Query: 173 tctacagacagatatcacacctgattttgttatttttcaacaatatcgcagtgggctcgt 232
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tctacagacaaatatcacacctgattttgttatttttcaacaatatcgcagtgggctcgt 497
Query: 233 ccatttcctaatctctaaaatactaacaagaagttttcttatagtttctgtgagaatttc 292
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 496 ccatttcctaatctctaaaatgctaacaagaagttttcttctagtttctgtgagaatttc 437
Query: 293 acatagtcatacacataaggtgtttcaaatcacatcagagatatgttataaagtgtatat 352
|||||||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||
Sbjct: 436 acatagtcatacacataaggtgtttcaaatcatatcagaaatatgttatagagtgcatat 377
Query: 353 ctaaagcatatatgaaacaacgtgagctctaggcacatgctagctagggtttctttatgg 412
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctaaagcatatacgaaaggacgtgagctctaggcacatgctagctagggtttctttatgg 317
Query: 413 tggtttataaacatgggttagtatgtgtgcacgtaccctacattaactgtgagt------ 466
|||| |||||||||| |||||||||||||||||||| ||| ||||| ||||| |
Sbjct: 316 tggtgtataaacatgcgttagtatgtgtgcacgtacactatattaa-tgtgaattattaa 258
Query: 467 attcataatattttcttcaagatggttgtaggggatgcttcaacaataatttccttt 523
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 257 attcataatattttcttcaagatggttgtaggggatgcttcaacaataattcccttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 936
Length adjustment: 10
Effective length of query: 513
Effective length of database: 926
Effective search space: 475038
Effective search space used: 475038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
