Query= MSMg01no325_i13.b1 MSMg01no325_i13.b1 CHROMAT_FILE:
MSMg01no325_i13.b1 PHD_FILE: MSMg01no325_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:03 2005
(479 letters)
>mm_chr8_122680476_122681353
Length = 878
Score = 874 bits (452), Expect = 0.0
Identities = 470/476 (98%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 1 attctccccagttgtcctctggaagtctagggccttgcccaccccatgccccctctgctt 60
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 attctccccag-ggtcttctggaagtctagggccttgcccaccccatgccccctctgctt 617
Query: 61 ccccaggaaatggtcccaccagacaaccacgggacttgaggcaagccaactcactcccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ccccaggaaatggtcccaccagacaaccacgggacttgaggcaagccaactcactcccac 557
Query: 121 tggcctcagctgcccctctgatgaagggttctacctcaaataatggcttgccagcagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggcctcagctgcccctctgatgaagggttctacctcaaataatggcttgccagcagagg 497
Query: 181 agccttggccagatgttgctgtgctcatctgctccctcccaaacacagcaaaaggcccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agccttggccagatgttgctgtgctcatctgctccctcccaaacacagcaaaaggcccag 437
Query: 241 ggcctccctagtgacagtcaaccgaagctctgaaatcctggctacaaagtcccacacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggcctccctagtgacagtcaaccgaagctctgaaatcctggctacaaagtcccacacttg 377
Query: 301 gtggtccggcagggccagcctggcttccacagggactgctcccttgtggctgacggagtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtggtccggcagggccagcctggcttccacagggactgctcccttgtggctgacggagtg 317
Query: 361 gttggcaacccgcgcccggtccacacaaaaagggcctctgtgttcccggggatgcgccct 420
| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggtggcaacctgtgcccggtccacacaaaaagggcctctgtgttcccggggatgcgccct 257
Query: 421 tcctgcttcccatgctttctgaacagggtcccacagggtgtgaggtgcaggactag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcctgcttcccatgctttctgaacagggtcccacagggtgtgaggtgcaggactag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 878
Length adjustment: 10
Effective length of query: 469
Effective length of database: 868
Effective search space: 407092
Effective search space used: 407092
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_i13.g1 MSMg01no325_i13.g1 CHROMAT_FILE:
MSMg01no325_i13.g1 PHD_FILE: MSMg01no325_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:03 2005
(416 letters)
>mm_chr8_122520410_122521225
Length = 816
Score = 721 bits (373), Expect = 0.0
Identities = 406/417 (97%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 1 aaggtgatcctcaaccatgtgatgaggtcaaggcttgcttgctctgtgtgagatcctgcc 60
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 201 aaggtgatcctcaaccatgtgatgaagtcaaggctcgcttgctctgtgtgagatcctgcc 260
Query: 61 ccagttgtgtgtgtggttctgtggatgtgtgtgcagaggagacagcaggtcacacggtca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagttgtgcgtgtggttctgtggatgtgtgtgcagaggagacagcaggtcacacggtca 320
Query: 121 ttggatgtgtaacggtgagaaagctggctccatcatact-ccgtgaggttggcttgagcc 179
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 321 ttggatgtgtaacggtgagaaagctggctccatcat-cttccgtgaggttggcttgagcc 379
Query: 180 gggctttcacccggcaggcagggagttcttccgtggtgggtatggacagacgctattgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggctttcacccggcaggcagggagttcttccgtggtgggtatggacagacgctattgcc 439
Query: 240 tagagttttgtggcagggctgacgtcttgtcctgagtcacagaaacccactgagaatcat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagagttttgtggcagggctgacgtcttgtcctgagtcacagaaacccactgagaatcat 499
Query: 300 gtctgagacattgccttggggcagcactgctctgtctccgaccccccccccgcaactgtg 359
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 500 gtctgagacattgccttggggcagcactgctctgtctccgacccctagcttgcaactgtg 559
Query: 360 gcactttcgggcagccccccgcccccctttccaggccatgaggacatcatgatccag 416
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 gcactttcgggcagccccccgcccccctttccaggccatgaggacatgatgatccag 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
