Query= MSMg01no325_p22.b1 MSMg01no325_p22.b1 CHROMAT_FILE:
MSMg01no325_p22.b1 PHD_FILE: MSMg01no325_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:36 2005
(339 letters)
>mm_chr8_9139053_9139791
Length = 739
Score = 572 bits (296), Expect = e-168
Identities = 325/335 (97%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagatggtcccgagccaggttctattatcattaccccaggaaaagatgggac 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagatgggcctgagccaggttctattatcattaccccaggaaaagatgggac 264
Query: 65 actcatattctcggtctgggccagaattttttaacataaaaattaatgtttctggggtct 124
||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 265 actcatagtctcggtctgggccaggattttttaacataaaaattaatgtttctggtgtct 324
Query: 125 ctaatttcctacaaaaaataaaccattccagtttccttcagccaggcaanaaaaaagact 184
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 325 ctaatttcctacaaaaaataaaccattccagtttccttcagccaggccaggaaaaagact 384
Query: 185 ccccaagggcttgaaatctagctcagctggtcactagccatctggctttggtcaagttat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccccaagggcttgaaatctagctcagctggtcactagccatctggctttggtcaagttat 444
Query: 245 tgaagcttgcaaaagctcatttctttcctccttgaaaataggataaataaagcaagtgct 304
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 445 tgaagcttgcagaagctcatttctttcctc-ttgaaaataggataaataaagcaagtgct 503
Query: 305 tgccattaaccaagatgcatgaacgatgctcacta 339
|||||||||||||||||||||||||||||||||||
Sbjct: 504 tgccattaaccaagatgcatgaacgatgctcacta 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_p22.g1 MSMg01no325_p22.g1 CHROMAT_FILE:
MSMg01no325_p22.g1 PHD_FILE: MSMg01no325_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:37 2005
(349 letters)
>mm_chr8_9309107_9309855
Length = 749
Score = 611 bits (316), Expect = e-179
Identities = 340/352 (96%), Gaps = 8/352 (2%)
Strand = Plus / Minus
Query: 1 caccacggacagagctacgccaccagccttctctctggttgctctgaagatccttctgaa 60
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 548 caccacggacagagccacgccgccagccttctctctggttgctctgaagatccttctgaa 489
Query: 61 tgtgagcatcaaataaatcttccctctcattcacagagaagaaagtgaccgatacagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgtgagcatcaaataaatcttccctctcattcacagagaagaaagtgaccgatacagata 429
Query: 121 aacaagcgaacggtattattaatgtcaccagtatttaaacccagctgactgatactttta 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 aacaagtgaacggtattattaatgtcaccagtatttaaacccagctgactgatactttta 369
Query: 181 atatgcactaattacaccccagcaattgaaagaattaccacagttttgaggttagccttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atatgcactaattacaccccagcaattgaaagaattaccacagttttgaggttagccttg 309
Query: 241 actaggcatttttt----cattgtcttaataaaacccagaaacaaaactattcattcaaa 296
|||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 actaggca----gtaaaacattgtcttaataaaacccagaaacaaaactattcattcaaa 253
Query: 297 taacatctaaagaaacggaaaaagcgatttccttctgctactattttcaccc 348
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 taacatctaaagaaacggaaaaagcgatttccttctgctactattttcaccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
