Query= MSMg01no326_i01.b1 MSMg01no326_i01.b1 CHROMAT_FILE:
MSMg01no326_i01.b1 PHD_FILE: MSMg01no326_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:13 2005
(613 letters)
>mm_chr8_84424242_84425254
Length = 1013
Score = 1170 bits (605), Expect = 0.0
Identities = 608/609 (99%)
Strand = Plus / Plus
Query: 5 gaattccacaaaggtaagtttgaagcacatgaagtggttatataataactaagtgattaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacaaagggaagtttgaagcacatgaagtggttatataataactaagtgattaa 264
Query: 65 cattttcatacgttactaggaaatcttgtagacatttcagatgttgaggttttgttttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattttcatacgttactaggaaatcttgtagacatttcagatgttgaggttttgttttac 324
Query: 125 aacaacaaataaagatacatcacatttctaaactctgtatgtttataagaatttataaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaacaaataaagatacatcacatttctaaactctgtatgtttataagaatttataaga 384
Query: 185 tcttgccaggtacagttaaacctgagtggccttttattgaatgcagtacaagtttctttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttgccaggtacagttaaacctgagtggccttttattgaatgcagtacaagtttctttt 444
Query: 245 tttcttttctaagtcttagagataagataacagaagtgttagaatgttttttatccctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttcttttctaagtcttagagataagataacagaagtgttagaatgttttttatccctga 504
Query: 305 aacatttttacttcagtaatgaatgagattgagtagtttctggctatacgttctcacatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacatttttacttcagtaatgaatgagattgagtagtttctggctatacgttctcacatt 564
Query: 365 cttctttcagatgaaaaatatagtaagctatgagtatttgtgatgtagtcaaattgataa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttctttcagatgaaaaatatagtaagctatgagtatttgtgatgtagtcaaattgataa 624
Query: 425 aacttaaaataatcatgaaaatatccaaatgataatctctttgaggatgcatttctatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacttaaaataatcatgaaaatatccaaatgataatctctttgaggatgcatttctatat 684
Query: 485 tttaagttattttctcattattctggaacggtgcagctacttcaagactttggtagaaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttaagttattttctcattattctggaacggtgcagctacttcaagactttggtagaaaa 744
Query: 545 tgagctttctgtctaattcttggcctgggtatagaagtattttagaagacttgaatttgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgagctttctgtctaattcttggcctgggtatagaagtattttagaagacttgaatttgt 804
Query: 605 tgacttgaa 613
|||||||||
Sbjct: 805 tgacttgaa 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_i01.g1 MSMg01no326_i01.g1 CHROMAT_FILE:
MSMg01no326_i01.g1 PHD_FILE: MSMg01no326_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:13 2005
(596 letters)
>mm_chr8_84591317_84592312
Length = 996
Score = 1100 bits (569), Expect = 0.0
Identities = 573/575 (99%), Gaps = 2/575 (0%)
Strand = Plus / Minus
Query: 1 ctgagatcctagactaagactgataaacagaagatatgtaagaactaaagaccttgccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ctgagatcctagactaagactgataaacagaagatatgtaagaactaaagaccttgccca 514
Query: 61 gttatccaattacatggatgacacaaaacagacattcgcagttccagtcacaaaactaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gttatccaattacatggatgacacaaaacagacattcgcagttccagtcacaaaactaac 454
Query: 121 ccagatttaatttagcagagatgagagtttgcaatttctgagtttgtaccagatgcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ccagatttaatttagcagagatgagagtttgcaatttctgagtttgtaccagatgcttcc 394
Query: 181 gtagccaaacagcttatgtaagtagtttctggcacgattgcaagagaatagagggggaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtagccaaacagcttatgtaagtagtttctggcacgattgcaagagaatagagggggaca 334
Query: 241 tctcagtgagattacagcaatgcatgtgcacaaaaacctcacaaaggttgggaagagaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctcagtgagattacagcaatgcatgtgcacaaaaacctcacaaaggttgggaagagaca 274
Query: 301 ccctcactaaaaatgatcacatgtcatctcaggttatcatgactacagaataaaatagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccctcactaaaaatgatcacatgtcatctcaggttatcatgactacagaataaaatagat 214
Query: 361 attcaatattcttacacacacacacacacacacacacacacacacacacacacacacatc 420
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 attcaatattctt--acacacacacacacacacacacacacacacacacacacacacatc 156
Query: 421 ttcaaggtcccaaagattcttttaaatatatatcactaaagtacattgtaactgttttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ttcaaggtcccaaagattcttttaaatatatatcactaaagtacattgtaactgttttta 96
Query: 481 aagcataaaacattatgcctaatttaatgcaatataacaaattctgaaaccacaatactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 aagcataaaacattatgcctaatttaatgcaatataacaaattctgaaaccacaatactg 36
Query: 541 aatgaacacaggtaattaattaatatttactctat 575
|||||||||||||||||||||||||||||||||||
Sbjct: 35 aatgaacacaggtaattaattaatatttactctat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
