NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATGAAACTCTTACGTAAATGGATGGAATTAGAAGATATCATCCT
GAGTGAGGTTAACCAATCACAAAAGAACACAATGAGCTTCCTTACTCAAG
GACTAGTTTCTTAATTGTCTCTTTGGTGCTCCCTGAAAGCAGACATATCT
GGAGTATGCAGGGTTTGTTTAAGATTCCAACCCATGAAGCCCTATGAGAG
AAAGTCCTAGAGGACGGAACGAATCTACCCGGCTTAATGGTTGCCTATTG
CTGTGGGTTACTGGACCATTCTTGTTGGGTTCCTCTGAAGAGTACAGGCA
ACATGTTCAGGATTATCCTTGCAAAAGACCAGTGAAAATGGGCACTAAGC
CACATATCCCCACCCCTCCATGCTTGCGCAACACCTCTCCTACACTCTGA
CTTGTTTGTTACTTGGTCCAGCAGCTGGCAATTTTATCAGGCACAGAAAT
AGAGGGAGTTGTTGGCATGCAGGGGACATTGCTCGGTGACCCTACTGAGT
AAGGCCAGTACCAGCAGCACCATCTGCACGAGCCCCCTTTCTCCCTGACC
TCCACTTATGTTGTTTCAGAATGTTCTACACTGTGTCCATCCTACCACAA
AGCTTTTTCTTCCCCTGTCTCACGCCCATTTTTTCAACTCCTTTCCAAGA
ACTCTTTGCTTCCTTTATGCCCAGCATCTGCN

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACAGAATGG
CAGAGAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CACATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAACGGCTAA
GATCAAAAATTCAGTTGACAGCAGATGCTGGTGAGGATGTAGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGTTTCCTCAGAAAATTGGACATAGTACTACCAGAGGA
TCCCGTAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTA
AGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAAAGGAATGGATACAGAA
AGTGTGGTACCTTTACACAATGGAATACTACTCAGCTATTAAAAAATGAA
TTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAG
TGAGGTAACCCAATCACAAAGGAACTCGCACAGATTGTACTCACTGATAA
GTAGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGATACAACTT
GTCAAAGGCATGAAATTTCAAGAAAACAAAGA

Query= MSMg01no328_d24.b1 MSMg01no328_d24.b1 CHROMAT_FILE:
MSMg01no328_d24.b1 PHD_FILE: MSMg01no328_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:21 2005
         (572 letters)



>mm_chr8_106364856_106365827
          Length = 972

 Score = 1013 bits (524), Expect = 0.0
 Identities = 557/568 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatgaaactcttacgtaaatggatggaattagaagatatcatcctgagtgaggtt 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 853 gaattcatgaaactcttaggtaaatggatggaattagaagatatcatcctgagtgaggtc 794

                                                                       
Query: 65  aaccaatcacaaaagaacacaatgagcttccttactcaaggactagtttcttaattgtct 124
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 acccaatcacaaaagaacacaatgagcttccttactcaaggactagtttcttaattgtct 734

                                                                       
Query: 125 ctttggtgctccctgaaagcagacatatctggagtatgcagggtttgtttaagattccaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctttggtgctccctgaaagcagacatatctggagtatgcagggtttgtttaagattccaa 674

                                                                       
Query: 185 cccatgaagccctatgagagaaagtcctagaggacggaacgaatctacccggcttaatgg 244
           ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 673 cccatgaagccctatgagagaaagtcctagaggacagaacaaatctacccggcttaatgg 614

                                                                       
Query: 245 ttgcctattgctgtgggttactggaccattcttgttgggttcctctgaagagtacaggca 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 613 ttgcctattgctgtgggttactggaccattcttgttgggttcctctgaagagtataggca 554

                                                                       
Query: 305 acatgttcaggattatccttgcaaaagaccagtgaaaatgggcactaagccacatatccc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acatgttcaggattatccttgcaaaagaccagtgaaaatgggcactaagccacatatccc 494

                                                                       
Query: 365 cacccctccatgcttgcgcaacacctctcctacactctgacttgtttgttacttggtcca 424
           ||||||||||||| || | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cacccctccatgcctgggtatcacctctcctacactctgacttgtttgttacttggtcca 434

                                                                       
Query: 425 gcagctggcaattttatcaggcacagaaatagagggagttgttggcatgcaggggacatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcagctggcaattttatcaggcacagaaatagagggagttgttggcatgcaggggacatt 374

                                                                       
Query: 485 gctcggtgaccctactgagtaaggccagtaccagcagcaccatctgcacgagcccccttt 544
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gctcagtgaccctactgagtaaggccagtaccagcagcaccatctgcacgagcccccttt 314

                                       
Query: 545 ctccctgacctccacttatgttgtttca 572
           ||||||||||||||||||||||||||||
Sbjct: 313 ctccctgacctccacttatgttgtttca 286


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)