MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-329B23
Chromosome	8 (Build37)
Map Location	71,145,253 - 71,145,593
singlet/doublet	singlet
Overlap gene	4732435N03Rik
Upstream gene	Psd3, Sh2d4a, LOC665510
Downstream gene	Ints10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561, LOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175
Link	Open Mouse BAC browser

Click to get alignment info.

name	Psd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234353 MGI:1918215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sh2d4a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72281 MGI:1919531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 3 Proteins

name	LOC665510 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	4732435N03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234356 MGI:2442354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ints10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70885 MGI:1918135
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lpl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16956 MGI:96820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041138 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Slc18a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110877 MGI:106684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11966 MGI:109618
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lzts1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211134 MGI:2684762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665540 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665540 MGI:3643381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D10627 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234358 MGI:2675306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 42 ESTs

name	D130040H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211135 MGI:2444324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665561 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins pseudo : _no_value

name	LOC670593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein

name	EG665578 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665578 MGI:3649141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein

name	LOC622336 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100041482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins pseudo : _no_value

name	LOC673968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 159 ESTs

name	AI449175 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234362 MGI:2142546
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Psd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540452 GeneID:234353 MGI:1918215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin and Sec7 domain containing 3 transcript_id : NM_177698.3

name	Psd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130715 GeneID:234353 MGI:1918215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin and Sec7 domain containing 3 transcript_id : NM_030263.4

name	Sh2d4a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258875 GeneID:72281 MGI:1919531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 3 Proteins product : SH2 domain containing 4A transcript_id : XM_001476079.1

name	LOC665510 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94383608 GeneID:665510
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical LOC665510 transcript_id : XM_977393.1

name	4732435N03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58332429 GeneID:234356 MGI:2442354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4732435N03 gene transcript_id : NM_172753.3

name	Ints10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354624 GeneID:70885 MGI:1918135
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrator complex subunit 10 transcript_id : NM_027590.2

name	Lpl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723005 GeneID:16956 MGI:96820
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoprotein lipase transcript_id : NM_008509.2

name	Slc18a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:79750941 GeneID:110877 MGI:106684
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 18 (vesicular monoamine), member 1 transcript_id : NM_153054.2

name	Atp6v1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19705577 GeneID:11966 MGI:109618
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V1 subunit B2 transcript_id : NM_007509.2

name	Lzts1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40786423 GeneID:211134 MGI:2684762
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine zipper, putative tumor suppressor 1 transcript_id : NM_199364.1

name	EG665540 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383610 GeneID:665540 MGI:3643381
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665540 transcript_id : XM_977642.1

name	D10627 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681697 GeneID:234358 MGI:2675306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence D10627 transcript_id : NM_001013379.2

name	LOC665553 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258877 GeneID:665553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 42 ESTs product : similar to membrane-associated ring finger (C3HC4) 5 transcript_id : XM_001476311.1

name	D130040H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665706 GeneID:211135 MGI:2444324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D130040H23 gene transcript_id : NM_172491.2

name	LOC670593 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258865 GeneID:670593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 1 Protein product : similar to ankyrin repeat domain 26 transcript_id : XM_001475988.1

name	EG665578 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258867 GeneID:665578 MGI:3649141
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 1 Protein product : predicted gene, EG665578 transcript_id : XM_977914.2

name	LOC673968 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258869 GeneID:673968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 159 ESTs product : hypothetical LOC673968 transcript_id : XM_001476042.1

name	AI449175 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930739 GeneID:234362 MGI:2142546
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI449175 transcript_id : NM_172754.2

name	AI449175 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930742 GeneID:234362 MGI:2142546
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI449175 transcript_id : NM_001045553.1

name	Psd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85540453 GeneID:234353 MGI:1918215
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IDA] [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032011 - ARF protein signal transduction [Evidence IC]; GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; guanine nucleotide exchange factor for ADP ribosylation factor 6 product : guanine nucleotide exchange factor for ADP ribosylation factor 6 isoform 2 protein_id : NP_808366.2

name	Psd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83921581 CCDS:CCDS22340.1 GeneID:234353 MGI:1918215
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IDA] [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0032011 - ARF protein signal transduction [Evidence IC]; GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; guanine nucleotide exchange factor for ADP ribosylation factor 6 product : guanine nucleotide exchange factor for ADP ribosylation factor 6 isoform 1 protein_id : NP_084539.2

name	LOC665510 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94383609 GeneID:665510
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982487.1

name	Sh2d4a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258876 GeneID:72281 MGI:1919531
definition	codon_start : 1 product : SH2 domain containing 4A protein_id : XP_001476129.1

name	4732435N03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58332430 CCDS:CCDS22341.1 GeneID:234356 MGI:2442354
definition	GO_component : GO:0030173 - integral to Golgi membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0047238 - glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity [Evidence ISS]; GO:0015020 - glucuronosyltransferase activity [Evidence ISS]; GO:0047237 - glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity [Evidence IEA] [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA] [Evidence ISS]; GO:0008955 - peptidoglycan glycosyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence ISS]; GO:0008037 - cell recognition [Evidence ISS]; GO:0030206 - chondroitin sulfate biosynthesis [Evidence ISS]; GO:0050653 - chondroitin sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis [Evidence ISS]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence ISS]; GO:0015014 - heparan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis [Evidence ISS]; GO:0030210 - heparin biosynthesis [Evidence ISS]; GO:0009653 - morphogenesis [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0046398 - UDP-glucuronate metabolism [Evidence ISS]; GO:0019276 - UDP-N-acetylgalactosamine metabolism [Evidence ISS] codon_start : 1 exception : mismatches in translation note : beta1,4 N-acetylgalactosaminyltransferase product : RIKEN cDNA 4732435N03 protein_id : NP_766341.3

name	Ints10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229115 CCDS:CCDS22342.1 GeneID:70885 MGI:1918135
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : integrator complex subunit 10 protein_id : NP_081866.1

name	Lpl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723006 GeneID:16956 MGI:96820
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0008201 - heparin binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0004465 - lipoprotein lipase activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : O 1-4-5 product : lipoprotein lipase protein_id : NP_032535.2

name	Slc18a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346439 CCDS:CCDS22344.1 GeneID:110877 MGI:106684
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0015238 - drug transporter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0015893 - drug transport [Evidence IEA]; GO:0006836 - neurotransmitter transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : vesicular amine transporter 1; chromaffin granule amine transporter product : solute carrier family 18, member 1 protein_id : NP_694694.1

name	Atp6v1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19705578 GeneID:11966 MGI:109618
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0015988 - energy coupled proton transport, against electrochemical gradient [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting, lysosomal (vacuolar proton pump), beta 56/58 kDa, isoform 2; lysosomal 56/58kDa; ATPase, H+ transporting, lysosomal 56/58kD, V1 subunit B, isoform 2; ATPase, H+ transporting, V1 subunit B, isoform 2 product : vacuolar H+ATPase B2 protein_id : NP_031535.2

name	Lzts1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40786424 CCDS:CCDS22345.1 GeneID:211134 MGI:2684762
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : leucine-zipper protein FEZ1; F37 esophageal cancer-related leucine zipper motif 1 product : leucine zipper, putative tumor suppressor 1 protein_id : NP_955396.1

name	EG665540 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383611 GeneID:665540 MGI:3643381
definition	codon_start : 1 product : hypothetical protein protein_id : XP_982736.1

name	D10627 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681698 GeneID:234358 MGI:2675306
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : zinc finger protein product : hypothetical protein LOC234358 protein_id : NP_001013397.2

name	LOC665553 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258878 GeneID:665553
definition	codon_start : 1 product : similar to membrane-associated ring finger (C3HC4) 5 protein_id : XP_001476361.1

name	D130040H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369670 GeneID:211135 MGI:2444324
definition	codon_start : 1 product : hypothetical protein LOC211135 protein_id : NP_766079.1

name	LOC670593 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258866 GeneID:670593
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476038.1

name	EG665578 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258868 GeneID:665578 MGI:3649141
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983008.2

name	LOC673968 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258870 GeneID:673968
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476092.1

name	AI449175 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930743 GeneID:234362 MGI:2142546
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Kruppel-like zinc finger protein protein_id : NP_001039018.1

name	AI449175 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930740 CCDS:CCDS22347.1 GeneID:234362 MGI:2142546
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : Kruppel-like zinc finger protein protein_id : NP_766342.2

name	LOC100041138 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041138
definition	number : 1 pseudo : _no_value

name	LOC100041138 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041138
definition	number : 2 pseudo : _no_value

name	LOC622336 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622336
definition	number : 1 pseudo : _no_value

name	LOC665561 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258883 GeneID:665561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 8 Proteins product : similar to isolog of yeast sui1 and rice gos2; putative pseudo : _no_value transcript_id : XR_032687.1

name	LOC100041482 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258884 GeneID:100041482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 4 Proteins product : similar to cadherin-11 pseudo : _no_value transcript_id : XR_032700.1

clone name	MSMg01-366A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138A23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-231C02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-157J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-066M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098F09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-138F05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-149B05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-218D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-265F19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-267B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-273D20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-381G04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-083F04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-103C17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-300C16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-338D16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-357H10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-362E08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-367D05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379F11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391B03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-406A14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424K02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-462E03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-484P24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502D13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-507C12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-514L17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-530C13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-532H08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-548E10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-349G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-519A08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525F18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-398A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-511N16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449E21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-465B23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-063N04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272E15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-329G19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-439I02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-325O13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186M19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-329B23.T7 (MSMg01no329_b23.b1)	MSMg01-329B23.TJ (MSMg01no329_b23.g1)
ACC	AG446039	AG446040
length	800	779
length of high quality (start - end)	124 (105 - 228)	343 (75 - 417)
definition	CHROMAT_FILE: MSMg01no329_b23.b1 PHD_FILE: MSMg01no329_b23.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:14:28 2005	CHROMAT_FILE: MSMg01no329_b23.g1 PHD_FILE: MSMg01no329_b23.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:14:28 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	AGACCAGAGTANCGAACTCGCCNGGAANNCCAGGNCTTTGNGCCTTACCG ACAAGNANNNNAACAACCAAAGCACGAAGCCCAACCTTCNTCTATTTTAG CCCAACAAAACGGTATTTAATGTAGTTTCCAAGAAAAGTGAGAAGAAACA AGTGTTTTCTTTGGTGCCCCTCATAAAAACCTTCCCCTTGCCACTTCACA ACCAATTCTGCCAAGACATGTCTGTAGCTGATTTTTGCTCAGGCTCTGGG ACACTTTAGAATTTTTTCTCAATTCCTCAATCCCTGACCCGCACCCCTTT ACCTCCTTTACAAGCCAACCNACCACGAAGCCNGAAGATGNGTTATTTTA CCCCACCCCGCTTTGATCTCCACAGGTCTGATTAGAACTATCCACCCCCC CCCTCGTTGTCTTTTTATTAGCTCATTACACCCGCCCTCTCCCCACTGTT TTATTTAACATACCCCATCTATACCTCTTATTACACCTATCACCTCTACC ATCATTCCCCCACCTTCTCCTTTCCCGTAATCTATCTCTTTTACCCTCCC TTCTTTTTTATTTCCCCCCCCTTTTTACATTCCCCCCCTCCATATTTCTC TTCCCCCCCCTTCATCCATCGTGCACCACACACCTATTTCTTCCCTTCCC CAACAATATCCAGAAAGCCCCAAATCTTCTTTTTTTTCTCTTTCCCAACC CCCTACCCAATACATATTTTTTTTTATCCCGACTTCCCCCTTTTTCCCTT ATCCCCCACCCTCCACCCACCTATTCCCCTCACCACCACCATATACTATG	ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXATGGTGCACTGCCCTCCTGACACATA ACTCTGGTCTCTGAAAGGAATTAGGATTTGTAATGAAATAGACATTTTCA GTCCACTTGGCAAGTGTTCACAGGCTATATTTGCATATACAAATGAGCTG AGGAGTTGAAAAATGAAAAACCCAAAATTAGCATTCTACGAGGAACTAAG CACTTGGACTCTTTTGGTCACTGACATTATTCCAGAAATACTTGTTGGCT TTTGAATGTGTTGATCATGATACACTGTCAAGGGTGAAAGGAGCTGGGTG TCTGACTTCTCTGCACCTAGAAGGGATGTCACTGCTGCTTCAGAACACCT GGTCTAGGAGGCTGACCCCCCCTCGCCTTGGACCTGTGAGGTACACAGTG GCAGAGGTGTGTGTGGGGGGTATTCTTAGCCCAGAATGGACCTTTATTTA ATGGACCAGTCATTACACAGGGTCCACAGATGCTTGCGGTAACAGAGATA TAAGTGCCTCCCTCCACTTATCATTTTACAGATCAAAGAGAACATTTCGT GTATTCCCTTATTAACTGATCATCCAACAAATATTTGCCAACATTACTGC CCCTTTACTTTTTTTCTACCACATCTGCCACTGTTCCCATTCCCCCCCTT TTAACCTTGTCATTCTTTCCATTTTTGCCTCATATTTATCTGCTCCTGCT GCCTCATTTATTTCCCTTTGTTTTGCCCG
quality values	Open. Hide. 6 6 6 6 10 3 3 3 6 6 3 0 3 6 6 6 6 6 6 6 6 3 0 3 17 23 3 0 0 3 17 19 17 3 0 3 7 7 3 3 0 3 6 6 6 6 7 9 9 10 11 11 11 11 3 0 3 0 0 0 0 3 23 23 37 23 19 9 9 9 9 15 21 10 10 10 21 17 6 6 6 7 7 9 9 19 27 27 3 0 3 23 10 9 9 11 10 13 9 9 6 8 8 8 13 19 39 37 37 47 59 59 59 59 59 59 59 57 50 47 47 42 39 43 43 50 50 43 32 42 39 39 39 43 39 36 28 33 31 31 20 30 30 30 30 30 37 37 47 46 42 41 42 42 47 47 46 46 48 48 42 27 20 13 10 10 25 32 59 59 59 59 59 59 43 41 39 47 47 57 57 54 57 57 57 59 59 59 57 48 48 48 48 48 48 48 54 54 44 43 43 36 36 43 43 48 57 48 48 48 57 48 48 48 48 48 48 48 43 43 37 31 31 23 34 31 22 23 8 8 8 8 8 8 12 13 10 11 18 27 32 37 37 28 28 32 31 28 23 23 14 15 15 32 32 36 36 28 23 23 23 23 28 33 37 39 47 37 37 37 39 35 35 47 59 48 48 44 37 37 30 30 31 23 23 11 11 11 22 23 15 13 8 8 8 8 9 10 12 9 6 7 7 9 8 9 7 7 6 6 6 8 8 11 18 18 34 23 23 3 0 3 10 8 8 8 10 15 14 12 12 3 0 3 18 10 10 9 9 3 0 3 11 7 10 8 6 8 7 7 7 7 8 7 7 7 12 10 10 9 9 10 10 10 15 12 12 12 12 13 26 24 18 15 11 11 11 11 11 14 11 13 11 11 11 11 8 8 8 8 10 8 11 12 12 14 24 24 32 34 14 12 10 9 8 8 10 8 13 13 8 8 10 10 9 7 7 8 8 8 8 8 11 11 11 10 8 8 8 7 7 8 8 6 6 8 8 11 10 10 22 15 12 6 6 8 8 8 8 10 8 7 7 11 16 15 10 10 9 8 10 10 14 12 16 12 12 8 8 6 6 8 10 12 11 12 12 10 10 9 9 9 12 11 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 9 8 8 8 8 8 10 12 10 10 12 15 10 8 8 8 8 10 13 16 9 9 9 9 6 6 6 6 8 8 8 8 8 8 8 8 8 6 10 10 10 9 10 12 10 10 12 17 12 12 8 10 8 9 10 8 10 9 9 11 13 10 10 12 14 15 10 10 10 10 10 8 8 8 8 8 8 8 6 6 16 22 15 12 11 6 8 7 7 8 10 8 8 8 8 8 10 10 8 9 9 12 23 24 15 14 11 11 14 12 13 12 10 13 9 8 8 10 9 9 6 6 6 8 8 10 10 12 10 8 8 8 10 6 6 6 8 10 8 8 8 8 8 8 10 10 10 12 13 10 8 8 8 8 8 8 6 6 8 8 8 9 8 11 9 9 9 12 8 8 8 8 8 9 9 12 8 9 10 15 22 15 12 10 11 11 8 8 13 13 15 10 6 7 7 6 8 10 14 14 9 9 9 10 8 8 8 8 7 7 7 10 8 11 9 9 14 14 21 15 15 13 13 15 14 12 15 13 6 6 6 6 11 10 9 9 10 14 13 18 11 12 11 12 12 13 9 8 8 8 8 8 8 13 14 9 11 8 10 8 8 10 8 8 8 10 8 9 9 12 8 9 9 10 13 9 9 9 9 9 9 9 7 7 7 8 7 9 11 15 10 8 8 8 10 10 10 9 9	Open. Hide. 3 3 6 6 8 11 11 9 9 23 13 19 10 9 9 21 26 33 33 50 50 53 53 50 50 50 50 47 41 25 25 11 9 9 9 9 9 11 11 17 16 13 22 23 29 44 44 36 36 50 50 50 50 57 57 57 57 57 43 42 24 24 17 19 11 12 12 12 11 23 26 42 48 42 48 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 50 50 50 50 50 42 41 41 50 50 50 51 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 68 59 59 59 59 54 59 59 68 68 59 59 59 68 68 68 68 57 57 57 68 68 68 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 43 43 43 43 50 57 57 68 68 68 68 68 68 68 68 68 68 68 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 54 54 57 57 48 48 43 46 46 47 47 47 48 47 54 59 59 68 68 68 68 68 59 57 59 59 59 59 59 57 57 57 53 48 48 57 46 59 59 59 59 59 59 59 59 59 59 43 23 19 8 8 8 9 10 11 9 10 9 9 9 9 9 25 30 41 40 40 40 43 48 50 53 50 50 50 50 57 57 57 57 57 59 59 43 40 30 30 32 37 47 48 43 48 43 43 43 48 43 42 39 35 37 36 32 37 28 28 37 37 48 59 59 47 47 35 37 43 31 39 35 37 37 28 28 32 37 37 41 47 47 59 41 34 28 23 19 21 15 14 14 21 30 28 47 47 47 48 43 48 34 37 30 30 24 32 28 28 23 28 28 33 43 37 32 32 28 23 25 20 17 10 10 10 10 11 12 11 11 11 23 18 18 18 28 34 28 37 30 21 21 15 15 10 14 22 23 20 24 22 25 22 24 34 30 26 26 20 20 20 30 28 15 10 10 10 13 15 18 15 12 15 12 12 11 11 11 18 11 11 11 19 22 19 12 12 11 13 8 8 8 8 9 9 11 10 10 8 10 10 10 10 12 14 10 13 10 8 8 8 8 10 12 11 12 15 15 24 31 28 28 21 18 14 14 15 11 10 10 10 11 8 8 8 8 8 10 9 11 10 10 10 8 10 10 22 9 9 9 12 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 15 13 12 12 12 11 10 8 8 8 10 8 11 19 19 23 17 13 17 11 8 8 8 8 8 8 8 8 10 11 11 12 12 12 12 10 10 10 8 7 9 10 10 9 9 10 9 9 8 8 8 8 8 8 8 9 8 10 10 10 8 8 8 6 8 13 9 11 11 11 11 11 15 10 10 10 14 9 11 9 9 8 8 8 8 8 8 8 8 10 10 11 7 6 8 8 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no329_b23.g1 MSMg01no329_b23.g1 CHROMAT_FILE:
MSMg01no329_b23.g1 PHD_FILE: MSMg01no329_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:28 2005
         (343 letters)



>mm_chr8_71145053_71145795
          Length = 743

 Score =  659 bits (341), Expect = 0.0
 Identities = 341/341 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggtgcactgccctcctgacacataactctggtctctgaaaggaattaggatttgtaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 atggtgcactgccctcctgacacataactctggtctctgaaaggaattaggatttgtaat 482

                                                                       
Query: 61  gaaatagacattttcagtccacttggcaagtgttcacaggctatatttgcatatacaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaatagacattttcagtccacttggcaagtgttcacaggctatatttgcatatacaaat 422

                                                                       
Query: 121 gagctgaggagttgaaaaatgaaaaacccaaaattagcattctacgaggaactaagcact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gagctgaggagttgaaaaatgaaaaacccaaaattagcattctacgaggaactaagcact 362

                                                                       
Query: 181 tggactcttttggtcactgacattattccagaaatacttgttggcttttgaatgtgttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tggactcttttggtcactgacattattccagaaatacttgttggcttttgaatgtgttga 302

                                                                       
Query: 241 tcatgatacactgtcaagggtgaaaggagctgggtgtctgacttctctgcacctagaagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcatgatacactgtcaagggtgaaaggagctgggtgtctgacttctctgcacctagaagg 242

                                                    
Query: 301 gatgtcactgctgcttcagaacacctggtctaggaggctga 341
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgtcactgctgcttcagaacacctggtctaggaggctga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space:   245156
Effective search space used:   245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information