Query= MSMg01no333_h17.b1 MSMg01no333_h17.b1 CHROMAT_FILE:
MSMg01no333_h17.b1 PHD_FILE: MSMg01no333_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:40 2005
(695 letters)
>mm_chr8_110595211_110596302
Length = 1092
Score = 1249 bits (646), Expect = 0.0
Identities = 678/690 (98%), Gaps = 5/690 (0%)
Strand = Plus / Plus
Query: 7 ttcta-cttttttcccccaaattaaaaaaaaaaggattaatgaaacttttaaaattcaat 65
||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttctacctttttt-cctcaaattaaaaaaaaaaggattaatgaaacttttaaaattcaat 265
Query: 66 tttaggatttattgaacattaataacgtgaaaacatagcccttgtttttttgcaaccgca 125
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttaggatttattgaacattgataacgtgaaaacatagcccttgtttttttgcaaccgca 325
Query: 126 tacttcagcggggaaaggaagaaagggcttgcctgtaaatagtaggggagcttagactct 185
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 326 tacttcagcggggagaggaagaaaggacttgcctgtaaatagtaggggagcttagactct 385
Query: 186 ggctaattacatatatggaggattttggtctgttttgtttttacataaatgataatttca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ggctaattacatatatggaggattttggtctgttttgtttttacataaatgataatttca 445
Query: 246 ggttatttgttatcttgcctaaggaatgactgagagtgctgggtaatttccttaatttag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggttatttgttatcttgcctaaggaatgactgagagtgctgggtaatttccttaatttag 505
Query: 306 ctttgatgttggggaagcccaaacagagtcacgccattatctagatggctgtagctccat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctttgatgttggggaagcccaaacagagtcacgccattatctagatggctgtagctccat 565
Query: 366 tgccttgacactttaagaaaattggccttccatacaggaaatagtctcatcagtgatatc 425
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tgccttgatattttaagaaaattggccttccatacaggaaatagtctcatcagtgatatc 625
Query: 426 ctactcagcagaggacatacagtcctgggagggggctggaaataagccaggggcttccta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctactcagcagaggacatacagtcctgggagggggctggaaataagccaggggcttccta 685
Query: 486 aaagaacctttctaatggccctgcaagcaaccttggatttagtattctgccaagagtcta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 aaagaacctttctaatggccctgcaagcaaccttggatttagtattctgccaagagtcta 745
Query: 546 caaaggtgccacacttacacatggtccctgggaatggcttaaaactaagtgctattaagc 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 caaaggtgccacacttacacatggtccctgggaatggcttaaaactaagtgctattaagc 805
Query: 606 tttcttttgttctctatataaaaaaaaaaagagatttatactacgcatcataaacaggag 665
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 806 tttcttttgttctctatataaaaaaaa---gagatttatactacacatcataaacaggag 862
Query: 666 tcagaggaactctggagctgttctgagggg 695
||||||||||||||||||||||||||||||
Sbjct: 863 tcagaggaactctggagctgttctgagggg 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1092
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1082
Effective search space: 741170
Effective search space used: 741170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_h17.g1 MSMg01no333_h17.g1 CHROMAT_FILE:
MSMg01no333_h17.g1 PHD_FILE: MSMg01no333_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:40 2005
(164 letters)
>mm_chr8_110764368_110764931
Length = 564
Score = 288 bits (149), Expect = 1e-82
Identities = 159/163 (97%), Gaps = 2/163 (1%)
Strand = Plus / Minus
Query: 1 cttattgtttcccggtaaagtggagaagaactctacaaagaggaagtctgggagaaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 356 cttattgtttcccggtaaagtggagaagaactctacaaagaggaagtctggaagaaccat 297
Query: 61 gtgtcttgggctcccttctgaaagggaagcattttattcaggattggcaaatgtcaaatc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtgtcttgggctccgttctgaaagggaagcattttattcaggattggcaaatgtcaaatc 237
Query: 121 tatctatatatatttgggaggggagaggt--gggggggtaggt 161
||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 236 tatctatatatatttgggaggggagaggtgggggggggtaggt 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
