Query= MSMg01no333_n13.b1 MSMg01no333_n13.b1 CHROMAT_FILE:
MSMg01no333_n13.b1 PHD_FILE: MSMg01no333_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:07 2005
(342 letters)
>mm_chr8_10805897_10806637
Length = 741
Score = 638 bits (330), Expect = 0.0
Identities = 339/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Minus
Query: 1 aaaatgtggcataatatatgctgggaaagtagggtgtcatcagattctatttttgagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaatgtggcataatatatgctgggaaagtagggtgtcatcagattctatttttgagagt 482
Query: 61 tcacctgaactgcaactttggcacggttgctttagcgagaatgtattttattctttgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcacctgaactgcaactttggcacggttgctttagcgagaatgtattttattctttgaac 422
Query: 121 aaggacctaagatgtaaatgtacaaatgcattgctataggaacaacatgtgcttgtctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggacctaagatgtaaatgtacaaatgcattgctataggaacaacatgtgcttgtctgg 362
Query: 181 ccctaatgccctctaactccaccttctgtgagttcttgctctgctaaactgaagcagggg 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccctaatcccctctaactccaccttctgtgagttcttgctctgctaaactgaagcagggg 302
Query: 241 aagatgccactcggctaaaaagttcagccagagaatctcctaatgttactggcaaaaaaa 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagatgccactctgctaaaaagttcagccagagaatctcctaatgttactggcaaaaaaa 242
Query: 301 gaaaactttgcaacagatcctggaactgaagaatagagagag 342
||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gaaaactttgcaacagatcctggaactgaag-atagagagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_n13.g1 MSMg01no333_n13.g1 CHROMAT_FILE:
MSMg01no333_n13.g1 PHD_FILE: MSMg01no333_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:21:07 2005
(249 letters)
>mm_chr8_10627978_10628626
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 cacctggtgtgaagccagcagaccctgagctgagatgtggcagggcccgtggcctcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacctggtgtgaagccagcagaccctgagctgagatgtggcagggcccgtggcctcctgt 260
Query: 61 gacttcttctttccctaaaatgaaataaatgtttccctttcagaagcaaaatgatcattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttcttctttccctaaaatgaaataaatgtttccctttcagaagcaaaatgatcattt 320
Query: 121 tgttaccagaataagttttacctcttaatgataacatttggtttacttggaaatagcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttaccagaataagttttacctcttaatgataacatttggtttacttggaaatagcaaa 380
Query: 181 cgacaatcaaataattgatgtgttattgttaccaatacatcataagatcacaaaagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgacaatcaaataattgatgtgttattgttaccaatacatcataagatcacaaaagagga 440
Query: 241 cagacactg 249
|||||||||
Sbjct: 441 cagacactg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
