Query= MSMg01no335_i20.b1 MSMg01no335_i20.b1 CHROMAT_FILE:
MSMg01no335_i20.b1 PHD_FILE: MSMg01no335_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:21 2005
(552 letters)
>mm_chr8_82457723_82458674
Length = 952
Score = 1052 bits (544), Expect = 0.0
Identities = 550/552 (99%)
Strand = Plus / Plus
Query: 1 attccctcatgatttttgtatattttaatgaatctccttgggaagccactagagtataac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 attccctcatgatttttgtatattttaatgaatctccttgggaagccactggagtataac 260
Query: 61 aatatatttcagaataatctcaacttaattttaattgtacactaactcccccatccctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatatatttcagaataatctcaacttaattttaattgtacactaactcccccatccctgg 320
Query: 121 ttatatgatttatatgactgtttttgtagttgatagaggccttgcgtagctaatgacata 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatatgatttatatggctgtttttgtagttgatagaggccttgcgtagctaatgacata 380
Query: 181 tgtttccaattgttgttatatgcagctgacttacaaatcaatagaaaatacagttaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttccaattgttgttatatgcagctgacttacaaatcaatagaaaatacagttaagat 440
Query: 241 ctactcattatgtctctatctgacctgtacagttgctgggaccaagtgccccttctctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactcattatgtctctatctgacctgtacagttgctgggaccaagtgccccttctctgt 500
Query: 301 catgtacacttcagttcctgggtcttttggtttcactctgaagggctctcattagcattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgtacacttcagttcctgggtcttttggtttcactctgaagggctctcattagcattt 560
Query: 361 ctcactggacacatctcaggttcacttactggtttctcatgaatttacttgagaaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcactggacacatctcaggttcacttactggtttctcatgaatttacttgagaaagaag 620
Query: 421 atgatggagccacaggagtcgtcaggaaaatcattaggagtcacagacaaacgataaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgatggagccacaggagtcgtcaggaaaatcattaggagtcacagacaaacgataaaac 680
Query: 481 aataattccccccattcttgcttataacccatttcacattcctcagacataatatagttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aataattccccccattcttgcttataacccatttcacattcctcagacataatatagttc 740
Query: 541 ttttactgttga 552
||||||||||||
Sbjct: 741 ttttactgttga 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_i20.g1 MSMg01no335_i20.g1 CHROMAT_FILE:
MSMg01no335_i20.g1 PHD_FILE: MSMg01no335_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:21 2005
(497 letters)
>mm_chr8_82665459_82666355
Length = 897
Score = 768 bits (397), Expect = 0.0
Identities = 403/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Minus
Query: 93 gggggccatgggaggagcttaaagtggtaaaattatgtaaatacagtactcagacatgaa 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gggggccatgggaggagcttaaagtggtaaaattatgtaaatacagtactcagacatgaa 838
Query: 153 aattttaaaaattaaataaaaaataagttcagctctcaggagacagagataggggggatc 212
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 837 aattttaaaaattaaataaaaaataagttcagctctcaggagacagagata-gggggatc 779
Query: 213 tttgtgagtctgaggacactctgatctacatagtaaattccaggccaaacaggcctatgt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tttgtgagtctgaggacactctgatctacatagtaaattccaggccaaacaggcctatgt 719
Query: 273 agtcagaccctataccaaaaacagacaattaaaaattagtgtagaatatgtacattttat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 agtcagaccctataccaaaaacagacaattaaaaattagtgtagaatatgtacattttat 659
Query: 333 atcattgtaaacttggtgttcatggagtacaaccatcaggacgtgacttagaatccccca 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atcattgtaaacttggtgttcatggagtacaaccatcaggacgtgacttagaatccccca 599
Query: 393 gaacgatggaaaagctgacgtgggcagcacctgtttaggatgccagtgcctatattgaac 452
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 598 gaacgatggaaaagctgacgtgggcagcacctgtttaggatgccagtgcctgtattgaac 539
Query: 453 gctgggaagcagaggcagaagcatctgtggaagctaaaatgccag 497
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gctgggaagcagaggcagaagcatctgtggaagctaaaatgccag 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
