Query= MSMg01no337_d06.b1 MSMg01no337_d06.b1 CHROMAT_FILE:
MSMg01no337_d06.b1 PHD_FILE: MSMg01no337_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:30 2005
(433 letters)
>mm_chr8_87158087_87158919
Length = 833
Score = 804 bits (416), Expect = 0.0
Identities = 425/428 (99%), Gaps = 2/428 (0%)
Strand = Plus / Plus
Query: 5 gaattccagcacatttccg-ttcacagcctcctgtaaccagagctccagggacccagtgc 63
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagcacatg-ccggttcacagcctcctgtaaccagagctccagggacccagtgc 263
Query: 64 cctctcctcgccttctcaagcacctacacacaggtgcacaaactcacacacatgtacaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctctcctcgccttctcaagcacctacacacaggtgcacaaactcacacacatgtacaca 323
Query: 124 aataataaactaattaaaaaaaaaaaagaaaactagaatcctaactccacagctggagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aataataaactaattaaaaaaaaaaaagaaaactagaatcctaactccacagctggagag 383
Query: 184 tggagctcatggtatccccctgcttagcatgggcggacctggtgcacttcacacacatac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tggagctcatggtatccccctgcttagcatgggcggacctggtgcacttcacacacatac 443
Query: 244 cacttacatgcaatacatacatacatgcacatgcatccgtgtgttcccagtgttaacagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cacttacatgcaatacatacatacatgcacatgcatccgtgtgttcccagtgttaacagg 503
Query: 304 catgtccgtgtgcacgcacatggcctgctgccttcaggaatagagcatgtctgaagaatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 catgtccgtgtgcacgcacatggcctgctgccttcaggaatagagcatgtctgaagaatc 563
Query: 364 acaaagcagagtctgggtgttcctgggatggctgtcacatgtctgggagggttggggggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acaaagcagagtctgggtgttcctgggatggctgtcacatgtctgggagggttggggggt 623
Query: 424 tgggtgtg 431
||||||||
Sbjct: 624 tgggtgtg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_d06.g1 MSMg01no337_d06.g1 CHROMAT_FILE:
MSMg01no337_d06.g1 PHD_FILE: MSMg01no337_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:30 2005
(429 letters)
>mm_chr8_87292802_87293630
Length = 829
Score = 830 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Minus
Query: 1 atagtacactgcgtgttgccagggccgcttctggccaggccgagactgaccgagctgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atagtacactgcgtgttgccagggccgcttctggccaggccgagactgaccgagctgcag 516
Query: 61 caaatactcggtacatgactgaagacatattctttgttaatcaaggcctagactttagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 caaatactcggtacatgactgaagacatattctttgttaatcaaggcctagactttagac 456
Query: 121 agtaactttgaatgttcaggatttcttaccggattggctagaatttcagggtaccctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agtaactttgaatgttcaggatttcttaccggattggctagaatttcagggtaccctttt 396
Query: 181 ggaggaaattcaggcattggtaaggccaggaccactcactcactgggcctcattgcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggaggaaattcaggcattggtaaggccaggaccactcactcactgggcctcattgcctgc 336
Query: 241 tcctcactgggtggttctggtgtgacagaaaacatcctctgactgctattgattctgtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcctcactgggtggttctggtgtgacagaaaacatcctctgactgctattgattctgtgg 276
Query: 301 ccttaccttctccattatctttccccaaaaaaatacccagctgagccacagtgtaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ccttaccttctccattatctttccccaaaaaaatacccagctgagccacagtgtaagaaa 216
Query: 361 tggggaccagggttgggtgttagagagatggctctgtggttaagaacacttgctcttcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tggggaccagggttgggtgttagagagatggctctgtggttaagaacacttgctcttcca 156
Query: 421 gaggacctg 429
|||||||||
Sbjct: 155 gaggacctg 147
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
