Query= MSMg01no337_o15.b1 MSMg01no337_o15.b1 CHROMAT_FILE:
MSMg01no337_o15.b1 PHD_FILE: MSMg01no337_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:25 2005
(569 letters)
>mm_chr8_88263808_88264777
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%), Gaps = 1/566 (0%)
Strand = Plus / Plus
Query: 5 gaattcatctactttcactctcattccactttctggtaagaaaaacatgaagctacagtg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatctactttcactctcattccactttctggtaagaaaaacatgaagctacagtg 264
Query: 65 agacgagagtttaacatcacagttaaactcaaatacaggatggctctggactcacatctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agacgagagtttaacatcacagttaaactcaaatacaggatggctctggactcacatctt 324
Query: 125 cataaatatcaaaaaaggtggcaactatggcgtctttgattagatttaggcctgctaggt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cataaatatcaaaaaaggtggcaactatggcgtctttgattagatttaggcctgctaggt 384
Query: 185 cccagtagactttaaacatccgatgcacttcttcgcagctcgcattattgcatgggacgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cccagtagactttaaacatccgatgcacttcttcgcagctcgcattattgcatgggacgt 444
Query: 245 tctccagtaaaaaggcttgctgattgctgtgtgacagacaagaggtattcagttaaaatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctccagtaaaaaggcttgctgattgctgtgtgacagacaagaggtattcagttaaaatc 504
Query: 305 aatgctatgaagcatcagctgtgctgtatcttccatccagtatatgtaaaattctgggat 364
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 505 agtgctatgaagcatcagctgtgctgtatcttccagccagtatatgtaaaattctgggat 564
Query: 365 tattgggttgagaggagaaacactctgtccccttttatgttgagtttctatgtccatcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tattgggttgagaggagaaacactctgtccccttttatgttgagtttctatgtccatcct 624
Query: 425 tcccccatttccactgttat-cccctctgccttgcgctttaagttattgaagtaacactt 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcccccatttccactgttattcccctctgccttgcgctttaagttattgaagtaacactt 684
Query: 484 taggtgtgtagctatcctctcagaatttaatcattctttcttggagacctataagactcg 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 taggtgtgtagctatcctctcagaatttaatcattctttcttggagacctataagacttg 744
Query: 544 gtaagtgaatgcaacttacataggtt 569
||||||||||||||||||||||||||
Sbjct: 745 gtaagtgaatgcaacttacataggtt 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_o15.g1 MSMg01no337_o15.g1 CHROMAT_FILE:
MSMg01no337_o15.g1 PHD_FILE: MSMg01no337_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:25 2005
(487 letters)
>mm_chr8_88414857_88415744
Length = 888
Score = 789 bits (408), Expect = 0.0
Identities = 417/420 (99%), Gaps = 3/420 (0%)
Strand = Plus / Minus
Query: 70 aaagaaatatggaaaaggaagtaaatgggccgagaaagatgtctgaggggctaagtgcac 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 aaagaaatatggaaaaggaagtaaatgggccgagaaagatgtctgaggggctaagtgcac 829
Query: 130 tggcttcaatcccagcacacactatctataacacaaaaccacagaatccaacactctctt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tggcttcaatcccagcacacactatctataacacaaaaccacagaatccaacactctctt 769
Query: 190 ctgacctcaaaaagaacattaggcacacatgtggtacatgaacatgtatgcggacaaaac 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ctgacctcaaaaagaacattaggcacacatgtggtacatgaacatgtatgcggacaaaac 709
Query: 250 acccatacagataaaattaataaggctttcagggagaggaaatggaataggggtgagcat 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 acccatacagataaaattaataaggctttcagggagaggaaatggaataggggtgagcat 649
Query: 310 gttggagtagatatgatcagaacacattctatgtacaaaactgtaaaagactaagagaga 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gttggagtagatatgatcagaacacattctatgtacaaaactgtaaaagactaagagaga 589
Query: 370 gtctgtt-aaaaaaataacaaaataagatgattggggagtctactttccatttacaaagt 428
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gtctgttaaaaaaaataacaaaataagatgattggggagtctactttccatttacaaagt 529
Query: 429 atctgagaaaatcagaaaaggtggcca-tgttgttctcacacaacagaagcaatagcctg 487
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 528 atctgagaaaatcagaaaaggtggccattg-tgttctcacacaacagaagcaatagcctg 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 888
Length adjustment: 10
Effective length of query: 477
Effective length of database: 878
Effective search space: 418806
Effective search space used: 418806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
