Query= MSMg01no337_p07.b1 MSMg01no337_p07.b1 CHROMAT_FILE:
MSMg01no337_p07.b1 PHD_FILE: MSMg01no337_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:29 2005
(511 letters)
>mm_chr8_50831548_50832459
Length = 912
Score = 936 bits (484), Expect = 0.0
Identities = 505/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 1 tctccttctc-aaatggacttttcctttcaaattgttttgtttcaatatcttttgaccac 59
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 712 tctccttctcaaaatggacttttcctttcaaattgttttgtttcaatatcttttgaaaac 653
Query: 60 atagaaaaatctaatagagatcattaagacagaacaactaatgagctgaatgatattaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atagaaaaatctaatagagatcattaagacagaacaactaatgagctgaatgatattaaa 593
Query: 120 gccctcttattgatttacttccattgtattaagagcaatattattttctttttcatctcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gccctcttattgatttacttccattgtattaagagcaatattattttctttttcatctcg 533
Query: 180 tgctcactcttacaaattaggccaattgtgtctgagtcattgtgattctttacctgtgaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgctcactcttacaaattaggccaattgtgtctgagtcattgtgattctttacctgtgaa 473
Query: 240 actgcctgatatcccacttatatccgtgaattcagcaaaaatctgttgagttcctctttg 299
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 472 actgcctgatatcccacttatatccgtaaattcagcaaaaatctattgagttcctctttg 413
Query: 300 aaatagactcattgatatcctcaggtatatccatgatactaaataacacagttctctaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaatagactcattgatatcctcaggtatatccatgatactaaataacacagttctctaaa 353
Query: 360 gaattacatatagaggaaatgaaaactgtgtctgaaagtttttgcttaagttaaatcaaa 419
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 352 gaattacatatagaagaaatgaaaactgtgtctgaaagtttttgctcaagttaaatcaaa 293
Query: 420 agcaataaaataaactccgtcaccatctggccagcaacatcattatattcctgttaattc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agcaataaaataaactccgtcaccatctggccagcaacatcattatattcctgttaattc 233
Query: 480 actcataaattaattaattaatttgttcattc 511
||||||||||||||||||||||||||||||||
Sbjct: 232 actcataaattaattaattaatttgttcattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space: 451902
Effective search space used: 451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_p07.g1 MSMg01no337_p07.g1 CHROMAT_FILE:
MSMg01no337_p07.g1 PHD_FILE: MSMg01no337_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:29 2005
(473 letters)
>mm_chr8_50736967_50737839
Length = 873
Score = 847 bits (438), Expect = 0.0
Identities = 465/474 (98%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 1 cacaaagcacccttgaaagcatatctttgaaaatatggtatatctccccaaaaaatcaga 60
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 201 cacaaagcacccttgaaagcatatctttgaaaatgtggtatatgtccccaaaaaatcaga 260
Query: 61 atggctgttcggattttctgaaatttca-aagaaaaaattgattacgtgcgaaataagtc 119
|||||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||
Sbjct: 261 atggctgttcagattttccgaaatttcagaa-aaaaaattgattacgtgcgaaataagtc 319
Query: 120 tttaatggacagaaggcttaaaatttgctaaataagtttgctgaaatatgtcaacttctt 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttaatggacagaatgcttaaaatttgctaaataagtttgctgaaatatgtcaacttctt 379
Query: 180 atactactaacctgcttctattttttattttaaaagtgcaaatagtatttatcacaaatg 239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 atactactaacctgcttctattttttattttaaaattgcaaatagtatttatcacaaatg 439
Query: 240 cagctcattcctttctatgtaacatacttagaatgtagtcatttcttcccatctatcacc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cagctcattcctttctatgtaacatacttagaatgtagtcatttcttcccatctatcacc 499
Query: 300 tctgtcacaattttcttaagatatctaacctctcaagcttacttctcttattacaaacca 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctatcacaattttcttaagatatctaacctctcaagcttacttctcttattacaaacca 559
Query: 360 tatgatttatgagcactgatagcttcttagacagctgtgagattagcattctaacctatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatgatttatgagcactgatagcttcttagacagctgtgagattagcattctaacctatc 619
Query: 420 ccagatcacctcagaaatggtttcctccagaatgtactgtcacattgaaaccga 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccagatcacctcagaaatggtttcctccagaatgtactgtcacattgaaaccga 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
