Query= MSMg01no338_f11.b1 MSMg01no338_f11.b1 CHROMAT_FILE:
MSMg01no338_f11.b1 PHD_FILE: MSMg01no338_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:57 2005
(632 letters)
>mm_chr8_117524308_117525339
Length = 1032
Score = 1170 bits (605), Expect = 0.0
Identities = 622/628 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtctctgccccttattaaccacacgtccaggactcagtgtgctcatctgtgaa 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtccctgccccttattaaccacacgtccaggactcagtgtgctcatctgtgaa 264
Query: 65 atgggggcgggggtgggtgggttctcacattgaccccctatagttgttctaaagtttgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgggggcgggggtgggtgggttctcacattgaccccctatagttgttctaaagtttgtg 324
Query: 125 caaataaaacacaatgtatctgctgctgaggtctcggtacagcccagttgcttgatgact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaataaaacacaatgtatctgctgctgaggtctcggtacagcccagttgcttgatgact 384
Query: 185 cttccccgagtcagttcattgagtcagactctgcacagggtagacattatttaggtttat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttccccgagtcagttcattgagtcagactctgcacagggtagacattatttaggtttat 444
Query: 245 tgtgccctagtctatgtcgcggagtgcatccttgatgttttcatgaattttccacgcagc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtgccctagtctatgtcgcggagtgcatccttgatgttttcatgaattttccacgcagt 504
Query: 305 tgcgccatgccaccagccaatgaaggtcagggagggaacagattaacagtatctcatacc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcgccatgccaccagccaatgaaggtcagggagggaacagattaacagtatctcatacc 564
Query: 365 acaatgtcagaatccttaaaagtgtttacagagccccgtgacacacaatgaatttcaaac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acaatgtcagaatccttaaaagtgtttacagagccccgtgacacacaatgaatttcaaac 624
Query: 425 aagaagaccagagccgaggtaaaactacccccgttccaagcttgagcagaggccttgatg 484
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 625 aagaagaccggagccgaggtaaaactacccccgttttaagcttgagcagaggccttgatg 684
Query: 485 ttttatgattgttttaaggtccattaatcgttgaatcatggggccatgtaaaaagatgac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttttatgattgttttaaggtccattaatcgttgaatcatggggccatgtaaaaagatgac 744
Query: 545 agctttaacatccagggcccgcgttcatttgaaatgtttttgtttctaccctgtccttaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agctttaacatccagggcccgcgttcatttgaaatgtttttgtttctaccctgtccttaa 804
Query: 605 ttaatggcaggngctaaaacctgcttca 632
||||||||||| ||||||||||||||||
Sbjct: 805 ttaatggcaggggctaaaacctgcttca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_f11.g1 MSMg01no338_f11.g1 CHROMAT_FILE:
MSMg01no338_f11.g1 PHD_FILE: MSMg01no338_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:57 2005
(428 letters)
>mm_chr8_117641114_117641941
Length = 828
Score = 760 bits (393), Expect = 0.0
Identities = 408/415 (98%), Gaps = 6/415 (1%)
Strand = Plus / Minus
Query: 1 aagatgagaggtgtggggtacaaggagaccttggttcccacggaaacacttgctctggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aagatgagaggtgtggggtacaaggagaccttggttcccacggaaacacttgctctggtg 701
Query: 61 tctctgcccccacacaggtgacatctctactgctgtggcaaggccaccggctgttgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tctctgcccccacacaggtgacatctctactgctgtggcaaggccaccggctgttgacct 641
Query: 121 ggttgaaccccatgcactcatacttggggaaaggaagtagagagaaggaaagagagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ggttgaaccccatgcactcatacttggggaaaggaagtagagagaaggaaagagagagta 581
Query: 181 agagagtgagggagcggcccatgacaatgaagtcatcctgtgatctcaaagggacactgc 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agagagcgagggagcggcccatgacaatgaagtcatcctgtgatctcaaagggacactgc 521
Query: 241 ccggc--gttcgctagttgcctcagacagctcacctggctgttgtgcggattatgagccc 298
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ccggccgg--cgctagttgcctcagacagctcacctggctgttgtgcggattatgagccc 463
Query: 299 cacgtaactatttcctcaccgaagggacagtggtatgtggcttggagggaagtcccattc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 cacgtaactatttcctcaccgaagggacagtggtatgtggcttggagggaagtcccattc 403
Query: 359 tcc--attctctctctctctctctctctctctctctctctctctctctctctctc 411
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tccatattctctctctctctctctctctctctctctctctctctctctctctctc 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
