Query= MSMg01no338_g05.b1 MSMg01no338_g05.b1 CHROMAT_FILE:
MSMg01no338_g05.b1 PHD_FILE: MSMg01no338_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:00 2005
(551 letters)
>mm_chr8_113086061_113087011
Length = 951
Score = 1019 bits (527), Expect = 0.0
Identities = 543/549 (98%), Gaps = 5/549 (0%)
Strand = Plus / Plus
Query: 5 ggaattctagccacttttc-cc-gctcctgctgaggttcttagatctagcaggaaaccca 62
|||||||||||||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctagccactt--caccagctcctgctgaggttcttagatctagcaggaaaccca 262
Query: 63 gctagctgccagagtatgggtccagtgagactagacactgtcagcctacagcatgcaaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctagctgccagagtatgggtccagtgagactagacactgtcagcctacagcatgcaaaa 322
Query: 123 catcactcacgcagcaaagaaacaatggctaatgtatctgggtcccatcctctaagatcc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catcactcacgcagcaaagaaacaatggctaatgtatctgggtcccatcctctaagatcc 382
Query: 183 tgcccaaggcagcagagtctcacatgtacataccaacctcacactgcaatccccaaattc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgcccaaggcagcagagtctcacatgtacataccaacctcacactgcaatccccaaattc 442
Query: 243 attctgctctgggttttcagacctggaagaaacttgggtctctgagctaaagcactacag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attctgctctgggttttcagacctggaagaaacttgggtctctgagctaaagcactacag 502
Query: 303 aacatatagaaatgtaaggacagaaactggtatatccaagacaatctttctctctcacag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aacatatagaaatgtaaggacagaaactggtatatccaagacaatctttctctctcacag 562
Query: 363 gacattgcgttttaagtatatgctacaattatcttgagaactatactagtggggggggga 422
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 gacattgcgttctaagtatatgctacaattatcttgagaactatactagtgggggggg-a 621
Query: 423 actggtgtctgcagggacattcaagaagtctcttataatgacattcttttcattttagca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 actggtgtctgcagggacattcaagaagtctcttataatgacattcttttcattttagca 681
Query: 483 ctaattctgcactgcatgctatatacagtatatatatttccatgggaaccctgtcagtcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctaattctgcactgcatgctatatacagtatatatatttccatgggaaccctgtcagtcc 741
Query: 543 gcactgcat 551
|||||||||
Sbjct: 742 gcactgcat 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_g05.g1 MSMg01no338_g05.g1 CHROMAT_FILE:
MSMg01no338_g05.g1 PHD_FILE: MSMg01no338_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:00 2005
(304 letters)
>mm_chr8_113246156_113246859
Length = 704
Score = 572 bits (296), Expect = e-168
Identities = 302/304 (99%)
Strand = Plus / Minus
Query: 1 agtaaattaccagatggataataatggctgaggtcccgaagcaggatccaatggtctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agtaaattaccagatggataataatggctgaggtcccgaagcaggatccaatggtctcct 424
Query: 61 tatgaccttgagccattcgcaggcctcagtttccccatctgaacagggtgcctgctcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tatgaccttgagccattcgcaggcctcagtttccccatctgaacagggtgcctgctcagt 364
Query: 121 ctgaccttgagtgatcaggaagggggggttgctgaaagcgctccccaggttgcttagcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctgaccttgagtgatcaggaagggggggttgctgaaagcgctccccaggttgcttagcca 304
Query: 181 acacacagcctacctcctccccaaggtggattcagtcctacccttgggctgcagggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 acacacagcctacctcctccccaaggtggattcagtcctacccttgggctgcagggagga 244
Query: 241 ccccaccctatgattggagtaatggagcttgctggatctgttggtgtgtgtgtgtgtgtg 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ccccacccgaggattggagtaatggagcttgctggatctgttggtgtgtgtgtgtgtgtg 184
Query: 301 tgtg 304
||||
Sbjct: 183 tgtg 180
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
