Query= MSMg01no340_i16.b1 MSMg01no340_i16.b1 CHROMAT_FILE:
MSMg01no340_i16.b1 PHD_FILE: MSMg01no340_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:34 2005
(621 letters)
>mm_chr8_39536724_39537745
Length = 1022
Score = 1187 bits (614), Expect = 0.0
Identities = 617/618 (99%), Gaps = 1/618 (0%)
Strand = Plus / Plus
Query: 5 gaattctccaatagttaaggggatggcttctgaatggagcagagaa-tacagtcatgtcc 63
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattctccaatagttaaggggatggcttctgaatggagcagagaaatacagtcatgtcc 264
Query: 64 tgcataaggactgtgtttttgtccgtgacaggccatacatatgaaagtggctccacaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcataaggactgtgtttttgtccgtgacaggccatacatatgaaagtggctccacaaaa 324
Query: 124 ttagaagtgaaaaaatatttaatattaatgtgtacatatagtttttttttaccaaatcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttagaagtgaaaaaatatttaatattaatgtgtacatatagtttttttttaccaaatcca 384
Query: 184 ttctccttctttcctctctaattcctcacatatctctcactacctcttctcccacacata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttctccttctttcctctctaattcctcacatatctctcactacctcttctcccacacata 444
Query: 244 tttatgttgctttccatttccctttttgaatagcccctgactccacttagtggtacctat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttatgttgctttccatttccctttttgaatagcccctgactccacttagtggtacctat 504
Query: 304 gtgagcatgagtgtgcaaccatatgttagagcattaataaccttttacacactgaattcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgagcatgagtgtgcaaccatatgttagagcattaataaccttttacacactgaattcc 564
Query: 364 ttaagaaaacagactattcgtttatcagaagctactaatttctaatagtcttcagtcagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaagaaaacagactattcgtttatcagaagctactaatttctaatagtcttcagtcagg 624
Query: 424 agtatggttgtatgagcccattccctatttcatgttaggattttctgactgctttgaatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtatggttgtatgagcccattccctatttcatgttaggattttctgactgctttgaatt 684
Query: 484 catggaagggttctatatgtaggcacagctactataaactcatgtctgcaactgctctat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 catggaagggttctatatgtaggcacagctactataaactcatgtctgcaactgctctat 744
Query: 544 tgggtcccataaactctcttgcactacagatatgtactctcttctgcaattacaatcttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgggtcccataaactctcttgcactacagatatgtactctcttctgcaattacaatcttt 804
Query: 604 ctgtcatcttcaatgttg 621
||||||||||||||||||
Sbjct: 805 ctgtcatcttcaatgttg 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_i16.g1 MSMg01no340_i16.g1 CHROMAT_FILE:
MSMg01no340_i16.g1 PHD_FILE: MSMg01no340_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:34 2005
(383 letters)
>mm_chr7_107521980_107522762
Length = 783
Score = 679 bits (351), Expect = 0.0
Identities = 370/381 (97%), Gaps = 8/381 (2%)
Strand = Plus / Plus
Query: 2 aataatgtatcttctccattattttatttatttatttattcattttacatcccagttgct 61
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 210 aataatgtatcttctccattat--------tttatttattcattttacatcccagttgct 261
Query: 62 gccccctctaccgacctcacagaatcactctcccacgataacgtatcttaactgtggtca 121
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 262 gccccctctaccgacctcacagagtccctctcccacgataacgtatcttaactgtggtca 321
Query: 122 actatggatttacaacagtattaaacaaaacttccaactacggagattttaaaatctgtc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actatggatttacaacagtattaaacaaaacttccaactacggagattttaaaatctgtc 381
Query: 182 cactggttttattgtctttatgcttttcaaataatatctttcaattaaagaaaagtttgg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cactggttttattgtctttatgcttttcaaataatatctttcaattaaagaaaagtttgg 441
Query: 242 attaacataagtgaccaggtaggttattttatggcctgtttttctagttacttctcagtt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attaacataagtgaccaggtaggttattttatggcctgtttttctagttacttctcagtt 501
Query: 302 ctgttaggaaaagccttctctgtcgacattgagttttatttttcattcaaagaatatata 361
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 502 ctgttaggaaaagccttctctgtcgacactgagttttatttttcattcaaagaatatata 561
Query: 362 gggtatatagaccttatccca 382
|||||||||||||||||||||
Sbjct: 562 gggtatatagaccttatccca 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
