Query= MSMg01no341_b15.b1 MSMg01no341_b15.b1 CHROMAT_FILE:
MSMg01no341_b15.b1 PHD_FILE: MSMg01no341_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:15 2005
(303 letters)
>mm_chr8_123801962_123802664
Length = 703
Score = 547 bits (283), Expect = e-160
Identities = 295/303 (97%), Gaps = 7/303 (2%)
Strand = Plus / Plus
Query: 1 ctaggcaacggcatcgccactccccagagctcatgttgagacccacaactaagacactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaggcaacggcatcgccactccccagagctcatgttgagacccacaactaagacactct 260
Query: 61 gcattcactggcagataggtttgttcccttatggggaaggatgtagggaggcgggaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcattcactggcagataggtttgttcccttatggggaaggatgtagggaggcgggaacaa 320
Query: 121 attgcatctctgtcagcaagaaaatcactggtcatctagtcagaggcagggcggctcacc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 attgcatctctgtcagcaagaaaatcactggtcatctagtcagcggcagggcggctcacc 380
Query: 181 tatcagctactggcagggcaggggagagccacccgttctgtggtacaggcatctgcagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatcagctactggcagggcaggggagagccacccgttctgtggtacaggcatctgcagtt 440
Query: 241 tacagatggatctgcctgtgacctatcactgacaaacagaagctgcaccggccggatggc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 tacagatggatctgcctgt-------cactgacaaacagaagctgcaccggccggatggc 493
Query: 301 gga 303
|||
Sbjct: 494 gga 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_b15.g1 MSMg01no341_b15.g1 CHROMAT_FILE:
MSMg01no341_b15.g1 PHD_FILE: MSMg01no341_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:15 2005
(353 letters)
>mm_chr8_123946924_123947676
Length = 753
Score = 601 bits (311), Expect = e-176
Identities = 338/353 (95%), Gaps = 10/353 (2%)
Strand = Plus / Minus
Query: 1 cagaccatggaacccatacatgccttcaacatttactgacgacctgcctcatttcataac 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 630 cagaccatggaacccatacatgccttcaacatgtactgacgacctgcctcatttcataac 571
Query: 61 aggccattggctgacgaagacgttattaggtcccatgagtgactcaaaggacgtacgtaa 120
||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 570 aggccattggctgacga----------aggtcccatgagtgactcaaaggatgtacgtaa 521
Query: 121 ttctgctagaacagcaaaagtgagaaagtcaggcaagccctagcgatcatggaaatgcag 180
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ttctgctagaacagcgatagtgagaaagtcaggcaagccctagcgatcatggaaatgcag 461
Query: 181 agagatgggagctcaaggtgcgatgtgtcacgggctgagaagaaagccaccaggaggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agagatgggagctcaaggtgcgatgtgtcacgggctgagaagaaagccaccaggaggacc 401
Query: 241 gaggatggcttttgatggaggaacggtggagactgtaccataagctgccccacaggtaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaggatggcttttgatggaggaacggtggagactgtaccataagctgccccacaggtaag 341
Query: 301 gcacttgtggggccaggtgtgctccgagttgacttcctgctcacacacgggtg 353
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gcacatgtggggccaggtgtgctccgagttgacttcctgctcacacacgggtg 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
