XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCCAGATAACATGTCCTAAAGTGAATCTTGTTTCATTCTGAGAAAGGTG
CACTGATAATATTCACTTGTTTGGCTTCAGATAATCCACAGTCAGGGCCA
CTGTGATAGATACCTGCAGCTCTCTCTCTCTCTCTCTACAAGTAGGGGCA
TGCCCCATCATTTTCTTCCTAACACCATCAGTCTCTCAGAATCCCACAGG
TTAAAATCCCCTAGCCCTTGCTACAGTGGTTAGCCCCAACTGCGTTCTGT
CTAGGCATATCCCATTTATCAGGCAACAGCACATACAAACAACTATCATC
ATTCTCATGGCAAATTTAGGACAGAAGTTGTTTCTCAGTTAAGGAGAAAT
ATAATTTCTTAGCTCTGTATAAAATCTCTGATAGTTCAGAAGGTCTTTCG
CTGTCAGAATGGGCCAGTTTTTAATGTTAAGCCAGTATTAAAAGATGGAA
GAAGAAATATGGAGATTTATGGCGGTACGCCTCTAACATCTTTAAACTCC
TGGGTTAAATTCTTTCTGAAGCATATGAACCATTCCTTTTAAAATTGAGC
TTTCTTAGAATCTGGGATAAAACAAAATCAAAGTGATAGCCTCTATACAC
ATTTCACTAATTTGCAACGATAATCTCCTTGCACTCCTCCCCCATACAAT
TGTATTTTTCCCTTTTCCCTTAACACCCAATATTGCGCTGTTCCTTCCTT
TTCCATTCACCTTTCCCCCTTTTCACCTCT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTTATATATTATGGATGTCAGCCCTCTTTCT
CATGTGGAGTGAAGATCTTTTCCCAATTTGTAGGCTGCCGTTTTGTCCTT
TTGCCTTACAGAAGCTTTTCAGTTTCATGAAGTCCCATTTATTAATTGTT
CATCTTAGTACCTGAGCTGTTGGTATTCTCTTCAGGACGTTTTCTCATGT
ACCAATGCATTCAGGCTACTTCCTACTTAATTTTCTATCAGGTCTAGTGT
GTCCAGTTTTATGTTGAGGTCTTTGATCCACTTGGACTTAAGTTTTGTGT
AGAGTGATAGTTATGGATCCACTTGCATTCTACATGCAGACATTGTTAGA
CCAGCATCATTTGTTGAAGATGCTTTCTTTTTTTCCCATTGTATAGTTTT
GGCTTCTTCATCATATTCAAGTGTGCATAGGTGTAATTTACTTCAGCCAT
TAAAAACAATGACCTCATCCAATTTGCAGATCAATGGACGGAACGAGGAA
AGATCACCCTGAACGACGTATTTCCTTACAAACACCAACAGGGTACGGAC
TTACTCATAACTTGACTTTCCTCCCCCTACAAAATACCTCCCTTACCACA
TTACCCATGTATATCACCCTTATTACTTCGGAAATGTTTCCTTGCCTTTT
TTCTATCCCCTCTCGTTCATCTTTCCACATTTCATCCCCTCTTGTTTTTT
TAATTCCACCCCTTTCTTCACCTC

Query= MSMg01no341_e20.b1 MSMg01no341_e20.b1 CHROMAT_FILE:
MSMg01no341_e20.b1 PHD_FILE: MSMg01no341_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:31 2005
         (434 letters)



>mm_chr8_105662176_105663005
          Length = 830

 Score =  745 bits (385), Expect = 0.0
 Identities = 418/431 (96%), Gaps = 4/431 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctccagataacatgtcctaaagtgaatcttgtttcattctgagaaaggtgcact 63
           ||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctagagaaaatgtcctaaagtgaatcttgtttcattctgagaaaggtgcact 263

                                                                       
Query: 64  gataatattcacttgtttggcttcagataatccacagtcagggccactgtgatagatacc 123
           |||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct: 264 gataatattcacttgtttggcttcagataatccaaagccagggccactgtgatggatacc 323

                                                                       
Query: 124 tgcagctctctctctctctctctacaagtaggggcatgccccatcattttcttcctaaca 183
           |||||||||||||||||||    |||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcagctctctctctctct----acaagtaggggcatgccccatcattttcttcctaaca 379

                                                                       
Query: 184 ccatcagtctctcagaatcccacaggttaaaatcccctagcccttgctacagtggttagc 243
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 380 ccatcagtctctcagaatcccacaggttaaaatcccctggcccttgctacagtggttagc 439

                                                                       
Query: 244 cccaactgcgttctgtctaggcatatcccatttatcaggcaacagcacatacaaacaact 303
           ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cccaactgcgtactgcctaggcatatcccatttatcaggcaacagcacatacaaacaact 499

                                                                       
Query: 304 atcatcattctcatggcaaatttaggacagaagttgtttctcagttaaggagaaatataa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atcatcattctcatggcaaatttaggacagaagttgtttctcagttaaggagaaatataa 559

                                                                       
Query: 364 tttcttagctctgtataaaatctctgatagttcagaaggtctttcgctgtcagaatgggc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttcttagctctgtataaaatctctgatagttcagaaggtctttcgctgtcagaatgggc 619

                      
Query: 424 cagtttttaat 434
           |||||||||||
Sbjct: 620 cagtttttaat 630


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 830
Length adjustment: 9
Effective length of query: 425
Effective length of database: 821
Effective search space:   348925
Effective search space used:   348925
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)