Query= MSMg01no342_d04.b1 MSMg01no342_d04.b1 CHROMAT_FILE:
MSMg01no342_d04.b1 PHD_FILE: MSMg01no342_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:39 2005
(424 letters)
>mm_chr8_82369292_82370115
Length = 824
Score = 735 bits (380), Expect = 0.0
Identities = 413/424 (97%)
Strand = Plus / Plus
Query: 1 cataacctgtgttcagattttcatagatacagacagatgaatagcaatgtgcttgtaagc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cataacttgtgttcagattttcatagatacagacagatgaatagcaatgtgcttgtaagc 260
Query: 61 agcatcttgaaaactggaggatcataaagaatgcttctacacactcaaacatgattaaag 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcatcttgaaaactggagaatcataaagaatgcttctacacactcaaacatgattaaag 320
Query: 121 gctgttgctctagatagagcacaataatctaataaactctcagtccatgtgtagctgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctgttgctctagatagagcacaataatctaataaactctcagtccatgtgtagctgaag 380
Query: 181 ggaaattttaaatgcttttttattatgtcttttaataaatttctatatcaaatgattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaattttaaatgcttttttattatgtcttttaataaatttctatatcaaatgattttt 440
Query: 241 ggatttctttgtttctcattcttggaactaatgaaaaattgaaccagataattctttgtt 300
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 ggatttctttatttctcattcttggaactattgaaaaattgaaccagataattctttgtt 500
Query: 301 gtggggagcctctattgtgtgtagaccattcagtggctctgtcttatgttccctagctgt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 gtggggagcctctattgtgtgtagaccattcagcggctctgtcttatgttccctagctgt 560
Query: 361 caaccatgacaattaaaaattaaaaattaaaaatgtctccagatgttgctaaatgtgccc 420
|||| || |||||||||||||||||||||||| ||||||||| |||||||||||| |||
Sbjct: 561 caactgtggcaattaaaaattaaaaattaaaaacgtctccagacgttgctaaatgtaccc 620
Query: 421 taca 424
||||
Sbjct: 621 taca 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_d04.g1 MSMg01no342_d04.g1 CHROMAT_FILE:
MSMg01no342_d04.g1 PHD_FILE: MSMg01no342_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:39 2005
(151 letters)
>mm_chr8_82556964_82557515
Length = 552
Score = 275 bits (142), Expect = 1e-78
Identities = 148/150 (98%), Gaps = 1/150 (0%)
Strand = Plus / Minus
Query: 1 ctgagaaa-aagcattcctttcagatattcacctgtagataacgttgtctttttcttaaa 59
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ctgagaaacaaacattcctttcagatattcacctgtagataacgttgtctttttcttaaa 291
Query: 60 cactagctaaattatttgctttttttcactttttaattctaataaactgtttttttaacc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cactagctaaattatttgctttttttcactttttaattctaataaactgtttttttaacc 231
Query: 120 tccctcttagcctaaagaacctttgatcca 149
||||||||||||||||||||||||||||||
Sbjct: 230 tccctcttagcctaaagaacctttgatcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 552
Length adjustment: 8
Effective length of query: 143
Effective length of database: 544
Effective search space: 77792
Effective search space used: 77792
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
