GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGGGCTTGC
CAGGAAATGTATTCTTATAGTTTGGCTTTCTTCTTTCTCTTCCCCACCAT
GCCCCTCTTCCTTTGGTGACTGAATGTGAACTTGTACATGCTAGGTACGT
GTTCTACCACTGAGCTATAGCCTCAGTTCTGAAAGCCTGGTGTTTTGAAG
TCAACACAGAGTGCAGGGTTAATAATAATGAGACCACTTGTATAATTGTT
CATTGTCTTGGCAGAGGCGCAGCGTGTGTTTCTGCCTGCAAATCTACTGT
TGTGTGAGCAAGCATGAAGTGTGAGGACCTTCAGAGGATCTTAGGTACTC
TCTGGTGGCAATGGAACAACGAAGATCCCTGTGTGACTGAACCCCTTAAA
TTACCTTGTGCTGTGAACTGGTCTTTTAGTAATCTGTCCTTAGGTTTAGG
ACTTGGGCTACTTTAAAAACTCGCGCCCCCCCCCCCGCCCCCCAGGGAAC
ACATTTTCAAAACTTTCACGGACTCATTTACACTTTCCCTGGCGTCGGGT
TTATCAGATCTCCAGTGAACAAGTTTTGATTGGCTGAGGTAACGCTTAAT
TTCTCCTATACTCCACCCTTTTTTTTTTTTTTCTTCTCCCTTCCTTTTTT
CTCTCTCTCTTTTTTTTTCTTTTTTTTTTTTTTTTTTTATGTTATCTTCC
TTTTCCCCCCCCCTTTTTTTC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXAGTGTGGAGCAGGGGGCAGGAGAATTGCTAATCTTGTGA
TGTTTATTTCTCTGAGAACAGCTAATATTGTTTTGGTAGCTGCAGGCTTA
ATCATTTTGACCGATAAAACTATGTTTTTACATTTGTTTAGTCAGCCAGC
TTCCTTATCTGGCTCTGCACTTGGCCTGCTGGTACAGTTTGGAAAGTCCT
TTTCGAAGGGGGAAGGTACTGGGTGGTCTTGAATTCATTTTGGATATTAC
ACAACCTTTCTGGATAACAAAAGACACCTGCCAGGGTGTCCTAGCCAACA
ACCAGGCCACAGCAAGATTCTGAAGAGAAACCAACCTTAACTAGCCAATC
ACCCAGCCATCCTCCACACTTGCTGAAGCTTTAGATGTGACAGCCAAGCA
GGACAGAGCAGAAAAGTGACTCAACTGAACCCTACAAAGTTAGGAGCTAA
AACAATTATCTTTTAGTCACTAAACTGGTAAATGTTTGTTATGCAGCAAT
AGCTGACTGGTGCAAGCTTTTAATCAAGGAACACAGCCAAATGTAGTGAT
AAATAAATTAAATAAATATATTAATCAATCAATTAATTTACTAATAATCA
AATTAACTAATATTTATATAATTAATTAAAGAAGGGACCCAAATTTCCCT
TTCCTTCCCCCTTTCTGGCCCCCTTTTGATGCTTN

Query= MSMg01no342_n20.b1 MSMg01no342_n20.b1 CHROMAT_FILE:
MSMg01no342_n20.b1 PHD_FILE: MSMg01no342_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:30 2005
         (497 letters)



>mm_chr8_32118801_32119697
          Length = 897

 Score =  938 bits (485), Expect = 0.0
 Identities = 493/497 (99%), Gaps = 3/497 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaatgtattcttatagtttggctttcttctttctcttccccaccatgcccctcttcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaaatgtattcttatagtttggctttcttctttctcttccccaccatgcccctcttcctt 685

                                                                       
Query: 61  tggtgactgaatgtgaacttgtacatgctaggtacgtgttctaccactgagctatagcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tggtgactgaatgtgaacttgtacatgctaggtacgtgttctaccactgagctatagcct 625

                                                                       
Query: 121 cagttctgaaagcctggtgttttgaagtcaacacagagtgcagggttaataataatgaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagttctgaaagcctggtgttttgaagtcaacacagagtgcagggttaataataatgaga 565

                                                                       
Query: 181 ccacttgtataattgttcattgtcttggcagaggcgcagcgtgtgtttctgcctgcaaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccacttgtataattgttcattgtcttggcagaggcgcagcgtgtgtttctgcctgcaaat 505

                                                                       
Query: 241 ctactgttgtgtgagcaagcatgaagtgtgaggaccttcagaggatcttaggtactctct 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctactggtgtgtgagcaagcatgaagtgtgaggaccttcagaggatcttaggtactctct 445

                                                                       
Query: 301 ggtggcaatggaacaacgaagatccctgtgtgactgaaccccttaaattaccttgtgctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggtggcaatggaacaacgaagatccctgtgtgactgaaccccttaaattaccttgtgctg 385

                                                                       
Query: 361 tgaactggtcttttagtaatctgtccttaggtttaggacttgggctactttaaaaactcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaactggtcttttagtaatctgtccttaggtttaggacttgggctactttaaaaactcg 325

                                                                       
Query: 421 cgcccccccccccgccccccagggaacacattttcaaaactttcacggactcatttacac 480
           ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cgcccccccc---gccccccagggaacacattttcaaaactttcacggactcatttacac 268

                            
Query: 481 tttccctggcgtcgggt 497
           |||||||||||||||||
Sbjct: 267 tttccctggcgtcgggt 251


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space:   431969
Effective search space used:   431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)