CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACATCTGAGCACAGTGTAGTCAAGGGACCAGACAAGAATAAGTA
AAAGGAAGGAAGGAGACAATGACTCAGCCTGGCTTTTTCTCAGTAAAAGA
AGATCTTACTGGATGGATCCCCAGGTGGGGCAGTCTCTGAATGGTCCTTC
CTTCAGTCTCAGTTCTGAACTCTGTCTCTGTAACTCCTTCCATGGATATT
TTGTTCCCCCTTCGAAGAAGGAACTAAGTATCCACACTTCTTCTTCTTGA
GTTTCATGATTTCTGCAAAATTGTATATTGGGTATTCTAAACTATTGCAA
CAAGATTTTGCTGACAGGACCCTGATATAGCAGTCTCCTGTGAGGCTATG
TCAGTGCCTGGTAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATG
GAACACAGGGTCCCCAATGAAGGAGCTAGAGAAAGTACCTAAGAAGCTGA
AGGAGTCTGCAGCCCTATAGGAGAAACAACAATATGAACTAACCAGTACC
CCCCAGAGCTCGTGTCTCTAGTGGCATACGTAGCAGAGGATGGCCTAATC
GGCCATCATTAATAGGAGAGGTCCTTGATCTTGCGAAGATCCTAAGTTCC
CGTATAGGGTATATGCCAGGTCTCTGAAATTGTTATTATGATAATTTGTG
TAATTGCTAAATTTCGTTTCTCTATTGTTTTTTTATTTATTTTTC

TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAAAATTCAGGTCATAAAGACAGGAGAGGACACA
TTTTGTCCTTGCTTTTTATGTCTTTCCATTTTGTAGAGAATGATGATGTG
AGGTAGCAAAGAGCAGAAGATAAAAGCATAACACTAAGAATGTCCCCATC
AAAGATTTCTAGATACTCTGGGCCTTTTACTCATCATGCAGAAAGGAAGC
AGAGGTTGCTAAATATCAGATAGTGTCCTTAGTGATGAAGTTGGTCTGAA
TACAGAAATATTTTGGGGACTATAAATCAAGATTCTGACATTAGCAGACA
GGGGATAAAATGAATAAAATCAGTGAAACTTTAAATCAAAAGTAACATTG
CCAATTTTTCTTATAGGTGCAAGGAAATAAACCACCTATTTTCCGTACCT
TTCCTCGGAAGCATAGAATTCATGTGCTTGAGGCTCCTGGTGACATTGAG
CCAACTCATTCCACCTGTGCTGCTGACAGCAGGGCTCCTGCTGATGCTGA
TCCAAATTCTTCCACCTGTGCTGCTGTCAATGGGGCTCCTGCTGNTGTTG
AGCCAACTACTTCTTCCCAGTGTGCTCTTGACTGTGAGGATCCTGCAGTC
ATTGAGCCCATTCATTCCCCTGTGCTGTTGACAGCAGGTTTCCTGCTGAA
GCTGAGCAAAATTCTTCCCCCTGTGGCGGTGGCAAAGGGGTTCCCGGTG

Query= MSMg01no344_c15.b1 MSMg01no344_c15.b1 CHROMAT_FILE:
MSMg01no344_c15.b1 PHD_FILE: MSMg01no344_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:15 2005
         (537 letters)



>mm_chr8_19998481_19999417
          Length = 937

 Score =  928 bits (480), Expect = 0.0
 Identities = 523/542 (96%), Gaps = 10/542 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacatctgagcacagtgtagtcaagggaccagacaagaataagtaaaaggaagga 64
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatctgaggatagtgtagtcaagggaccagacaagaataagtaaaaggaagga 264

                                                                       
Query: 65  aggagacaatgactcagcctggctttttctcagtaaaagaagatcttact-ggatggatc 123
           |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||
Sbjct: 265 aggagacaatgactcagcctggctttttctcagtaaaagaagatctta-tgggatagatc 323

                                                                       
Query: 124 cccaggtggggcagtctctgaatggtccttccttcagtctcagttctgaactctgtctct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccaggtggggcagtctctgaatggtccttccttcagtctcagttctgaactctgtctct 383

                                                                       
Query: 184 gtaactccttccatggatattttgttcccccttcgaagaaggaactaagtatccacactt 243
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 gtaactccttccatggatattttgttcccccttcgaagaaggaacgaagtatccacactt 443

                                                                       
Query: 244 --------cttcttcttgagtttcatgatttctgcaaaattgtatattgggtattctaaa 295
                   |||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 444 tggtcttccttcttcttgagtttcatgacttcagcaaaattgtatattgggtattctaaa 503

                                                                       
Query: 296 ctattgcaacaagattttgctgacaggaccctgatatagcagtctcctgtgaggctatgt 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctattgcaacaagattttgctgacaggaccctgatatagcagtctcctgtgaggctatgt 563

                                                                       
Query: 356 cagtgcctggtaaatacagaagtggatgctcacagtcatctattggatggaacacagggt 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagtgcctggtaaatacagaagtggatgctcacagtcatctattggatggaacacagggt 623

                                                                       
Query: 416 ccccaatgaaggagctagagaaagtacctaagaagctgaaggagtctgcagccctatagg 475
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 624 ccccaatgaaggagctagagaaagtacccaagaagctgaaggagtctgcagccctatagg 683

                                                                       
Query: 476 agaaacaacaatatgaactaaccagtaccccccagagctcgtgtctctagtggcatacgt 535
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 684 agaaacaacaatatgaactaaccagtactacccagagctcgtgtctctagtggcatacgt 743

             
Query: 536 ag 537
           ||
Sbjct: 744 ag 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)