Query= MSMg01no344_i23.b1 MSMg01no344_i23.b1 CHROMAT_FILE:
MSMg01no344_i23.b1 PHD_FILE: MSMg01no344_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:47 2005
(498 letters)
>mm_chr8_110048232_110049130
Length = 899
Score = 899 bits (465), Expect = 0.0
Identities = 489/497 (98%), Gaps = 2/497 (0%)
Strand = Plus / Minus
Query: 4 ggaattccacttcca-tacaactgtttgcttttcttgttattttgctttttgtttttatg 62
||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 859 ggaattccacttccagaagaactgtttgcttttcttgttactttgctttttgtttttatg 800
Query: 63 gatgagatagaatctcactccaggttgtccccaaccttgttgtatataccaagctagccc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 gatgagatagaatctcactccaggttgtccccaaccttgttgtatataccaagctagccc 740
Query: 123 catatttaagatcctcttggatctgtttcctgagtgctagttcttcctctatgtaaagta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 catatttaagatcctcttggatctgtttcctgagtgctagttcttcctctatgtaaagta 680
Query: 183 tgcaatcacatgtagtccttagtccagttttactatacagtgcctggcaagctactaatt 242
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 679 tgcaatcacatgtagtccttagtccagttttactatacagtgcctggcaaactactaatt 620
Query: 243 gggcattacttccctgcctccaacctc-tctgtcaagacagtgctgggtcaagcccagag 301
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 619 gggcattacttccctgcctccaacctcttctgtcaagacagtgctgggtcaagcccagag 560
Query: 302 cattatgtatgtcagacaagcacttttccactgtgctgcaggcccaaccagtcccaggac 361
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 559 cattatgtatgtcagacaagcacttttccactgtgctgcaggcccagccagtcccaggac 500
Query: 362 agtcagttcctacagaaacaagcacacatacaaaaaggcatgcacatgagaaggcctcac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agtcagttcctacagaaacaagcacacatacaaaaaggcatgcacatgagaaggcctcac 440
Query: 422 tgcagcccagttgcaatcgtagagaaacgagagattgcacaagcttctacgtcatacaac 481
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 439 tgcagcccagttgcaatcgtagagaaacgagagattgcacaagcttctacttcatacaac 380
Query: 482 agaaaaccgcatggtcc 498
|||||||||||||||||
Sbjct: 379 agaaaaccgcatggtcc 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 899
Length adjustment: 10
Effective length of query: 488
Effective length of database: 889
Effective search space: 433832
Effective search space used: 433832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_i23.g1 MSMg01no344_i23.g1 CHROMAT_FILE:
MSMg01no344_i23.g1 PHD_FILE: MSMg01no344_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:47 2005
(504 letters)
>mm_chr8_109948964_109949867
Length = 904
Score = 928 bits (480), Expect = 0.0
Identities = 498/504 (98%)
Strand = Plus / Plus
Query: 1 atagaactttctttacttttaaaggaaaaacctgtagatatggcatatggttgaaagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagaactttctttacttttaaaggaaaaacctgtagatatggcatatggttgaaagtca 260
Query: 61 gtagctagaaacaacaaatcacaacaaatcagtaggatatattcgattttacaagcaagg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 gtagctagaaacaacaaatcacaacaaatcagtagggtatattcgattttacaagcaagg 320
Query: 121 aagccaagctgacttggccagataacctccgaactgacttgaaaccactttttaaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagccaagctgacttggccagataacctccgaactgacttgaaaccactttttaaaatcc 380
Query: 181 gttgtgttatacagccacgcagtcctactttatttgaacatcttgggacaatggctgtat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 gttgtgttatacagccacgcagtcctactttatttgaatatcttgggacaatggctgtat 440
Query: 241 tactttatacctttgccccatctccctaagcaaggcacatgattttctagaaaatcgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactttatacctttgccccatctccctaagcaaggcacatgattttctagaaaatcgaac 500
Query: 301 agaaggggtagtaatgactattgatgacttccaattttcctttcaattctgggattagga 360
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 501 agaaggggtagtaatgactattaatgacttccgattttcctttcaattctgggattagga 560
Query: 361 gatctgggctactacatgctggcaacgctgatctgagcctttagcaactgctttcattta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatctgggctactacatgctggcaacgctgatctgagcctttagcaactgctttcattta 620
Query: 421 ctcatctgtcccgtatcaaaaacccttcagggccaggatggtaccttcgtctgacttaaa 480
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 621 ctcatctgtcccgtatcaaaaacccttcagtgccgggatggtaccttcgtctgacttaaa 680
Query: 481 tattttctgcatccccaaacatct 504
||||||||||||||||||||||||
Sbjct: 681 tattttctgcatccccaaacatct 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
