Query= MSMg01no344_j22.b1 MSMg01no344_j22.b1 CHROMAT_FILE:
MSMg01no344_j22.b1 PHD_FILE: MSMg01no344_j22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:52 2005
(491 letters)
>mm_chr8_8347239_8348129
Length = 891
Score = 864 bits (447), Expect = 0.0
Identities = 477/487 (97%)
Strand = Plus / Plus
Query: 5 gaattcgctgaatctcttctgattaattattcaccagcactcagaacttttcatgacact 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattcgctgaatctcttctgattaattattcaccagcactcagaacttttcatgatact 264
Query: 65 ttgtagactccatgaagctctaatgtattctatgcatggtatagaaattaggaaatccat 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtagactccatgaagccctaatgtattctatgcatggtatagaaattaggaaatccat 324
Query: 125 actttttcacaggaaaaaaataaaattacatcttccttttgattccttcagtgacctggt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actttttcacaggaaaaaattaaaattacatcttccttttgattccttcagtgacctggt 384
Query: 185 aagtgacaaatcacagaagtcacagcataacagtgattgacattgctttcattctcagct 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 aagtgacaaatcacagaagtcacagcataacagtgattgacatcgctttcattctcagct 444
Query: 245 ctctctaatcagtcaccacgcttagcacacagacctctttctaaatctcatgacttggtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 445 ctctctaatcagtcaccacgcttagcacacagacctctttctaaatctcatgacttgctg 504
Query: 305 cattcaccacgaagcacgcataccatgatctccaaaaacatgtatgctctcttaatgatt 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cattcaccacgaagcacgcacaccatgatctccaaaaacatgtatgctctcttaatgatt 564
Query: 365 ttcaaggtgactaaaaatatggtctgcttttctttgaaatgctaaaccatttattttaca 424
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 565 ttcaaggtgactaaaaatatggtctgcttttatttgaaatgctaaaccatttattttata 624
Query: 425 catttaggcatattttgggaggaaggtaagaaaacggtacatttaaggaattcatgacag 484
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 625 catttaggaatattttgggaggaaggtaagagaacggtacatttaaggaattcatgacag 684
Query: 485 gaaaata 491
|||||||
Sbjct: 685 gaaaata 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_j22.g1 MSMg01no344_j22.g1 CHROMAT_FILE:
MSMg01no344_j22.g1 PHD_FILE: MSMg01no344_j22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:52 2005
(504 letters)
>mm_chr8_8506710_8507613
Length = 904
Score = 909 bits (470), Expect = 0.0
Identities = 496/505 (98%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 1 tatgtcaaatgatgaggcagttccttgtgatttctgaaatagagagaggtacatttcttc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 704 tatgtcaaatgatgaggcagttccttgtgatttctggaatagagagaggtacatttcttc 645
Query: 61 ttgaggcagcacacaagaagacagg-tgcctctgttgactttgtgtattgatgttgtggt 119
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 644 ttgaggcagcacacaagaagacaggttgcctctgttgactttgtgtattgatgttgtggt 585
Query: 120 ctaatgggaatatcagcttaaattgcagaaacatctactccttcatctactttggagacc 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 584 ctaatgggaatatcagcttaaattgcagaaacatctactccttcatctactgtggagacc 525
Query: 180 tggaaccaagccagagtcaagttcaaggccttgagagatgctggaggcctatgtggtaca 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 524 tggaaccaagccagagtcaagttcaaggccctgagagatgctggaggcctatgtggtaca 465
Query: 240 aataatattcaagtcatcacttcctactacaacaacaacaaaaaaaggagctaagaaagg 299
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 464 aataatattcaagccatcacttcctactacaacaacaac-aaaaaaggagctaagaaagg 406
Query: 300 cagtgttaaccagttcatcaactgaattagcttgttctgtcttccaggaaacaatggctc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cagtgttaaccagttcatcaactgaattagcttgttctgtcttccaggaaacaatggctc 346
Query: 360 ctgtcagggaagagaagtgttcatagcaagctagcagaagcctcaaaaacggaggtttgt 419
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctgttagggaagagaaatgttcatagcaagctagcagaagcctcaaaaacggaggtttgt 286
Query: 420 agttaattttcaaaagcttaatggagaaaggaaaatatcttanacacaagtcctttgaac 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 285 agttaattttcaaaagcttaatggagaaaggaaaatatcttaaacacaagtcctttgaac 226
Query: 480 catcaaagactattgcttaggttca 504
|||||||||||||||||||||||||
Sbjct: 225 catcaaagactattgcttaggttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
