Query= MSMg01no344_o06.b1 MSMg01no344_o06.b1 CHROMAT_FILE:
MSMg01no344_o06.b1 PHD_FILE: MSMg01no344_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:13 2005
(165 letters)
>mm_chr8_12319198_12319762
Length = 565
Score = 296 bits (153), Expect = 5e-85
Identities = 162/165 (98%)
Strand = Plus / Minus
Query: 1 tcactcagagggggttagaacccaagactggcttcactcttggttccttagcaaccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcactcagagggggttagaacccaagactggcttcactcttggttccttagcaaccttgg 306
Query: 61 cagcatcatgtctcctaggtaacgtccatcctgcagacctgactctgtaaacttgaactc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 305 cagcatcatgtctcctaggtaacgtccatcctgcagacctgactctgtgaacttgaactc 246
Query: 121 tatcctgcctatggctggtatagatatctctaggggacagttacc 165
||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 245 tatcctgccaatgactggtatagatatctctaggggacagttacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 165
Length of database: 565
Length adjustment: 8
Effective length of query: 157
Effective length of database: 557
Effective search space: 87449
Effective search space used: 87449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no344_o06.g1 MSMg01no344_o06.g1 CHROMAT_FILE:
MSMg01no344_o06.g1 PHD_FILE: MSMg01no344_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:13 2005
(297 letters)
>mm_chr8_12103154_12103852
Length = 699
Score = 543 bits (281), Expect = e-159
Identities = 294/299 (98%), Gaps = 2/299 (0%)
Strand = Plus / Plus
Query: 1 tccttgttcaccattaaagcgcatcacttggattgtcggatattagtgttgtcacaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccttgttcaccattaaagcgcatcacttggattgtcggatattagtgttgtcacaggca 260
Query: 61 aggggccattggctctctcctaagcttcttaagcttttgagaatacccagaaggttccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggggccattggctctctcctaagcttcttaagcttttgagaatacccagaaggttccag 320
Query: 121 ggcaccctcaggggtcaccagtgctgggacccaaaggcctgaagcctcttgtagctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaccctcaggggtcaccagtgctgggacccaaaggcctgaagcctcttgtagctcttc 380
Query: 181 aaatgcaaacacagaggtggagcagcagttaccatacaggctggggcatagctggttccc 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgcaaacacagaggcggagcagcagttaccatacaggctggggcatagctggttccc 440
Query: 241 taaataggatcttcacaaaggatcagcgtcagtctgttccctctctc--ctgcttcccc 297
|||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||
Sbjct: 441 taaataggatcttcacaaaggatcagcggcagcctgttccctctctcttctgcttcccc 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 699
Length adjustment: 9
Effective length of query: 288
Effective length of database: 690
Effective search space: 198720
Effective search space used: 198720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
