Query= MSMg01no345_b03.b1 MSMg01no345_b03.b1 CHROMAT_FILE:
MSMg01no345_b03.b1 PHD_FILE: MSMg01no345_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:27 2005
(583 letters)
>mm_chr8_101754504_101755486
Length = 983
Score = 1104 bits (571), Expect = 0.0
Identities = 577/579 (99%)
Strand = Plus / Minus
Query: 5 gaattctttcttgggatttcttctatgcacatgtctatgccaaactatgtctatgacatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattctttcttgggatttcttctatgcacatgtctatgccaaactatgtctatgacatt 724
Query: 65 tccttaggatttgtttcagggtaatctctcttgaaaacctgcccatgaccactctgtgct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tccttaggatttgtttcagggtaatctctcttgaaaacctgcccatgaccactctgtgct 664
Query: 125 agaccaaaagaggggcccatgcttgctgctcctctattcgcttgagttcctgagtcaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agaccaaaagaggggcccatgcttgctgctcctctattcgcttgagttcctgagtcaata 604
Query: 185 tatatgttgccttctcttttgttccccacaaaactctctgcttctttagtacagggactt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 603 tatatgttgccttctcttttgttccccacaaaactctctgcttctttagtacacggactt 544
Query: 245 ttcattagcatatatgctgccattcaggagaggtctatgtgtgcagttgttataaaacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttcattagcatatatgctgccattcaggagaggtctatgtgtgcagttgttataaaacat 484
Query: 305 gtgagaagaggttttctttctgttatccatgggtctaattacctgagctagctgattaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtgagaagaggttttctttctgttatccatgggtctaattacctgagctagctgattaat 424
Query: 365 tggtggttcctctgttattttatattctgagaagttaagtgtgatagactaaaatattcc 424
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tggtgattcctctgttattttatattctgagaagttaagtgtgatagactaaaatattcc 364
Query: 425 tttgatatttatgttctggcttttacagcagacaacttttcaaagtacattcagttgtac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttgatatttatgttctggcttttacagcagacaacttttcaaagtacattcagttgtac 304
Query: 485 ttcagcaaaactcaagtgctacatgctgtattatattattaaccttttgtttcatatttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttcagcaaaactcaagtgctacatgctgtattatattattaaccttttgtttcatatttc 244
Query: 545 tttgatatggttcctttgcacattccttaagctcacaga 583
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tttgatatggttcctttgcacattccttaagctcacaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_b03.g1 MSMg01no345_b03.g1 CHROMAT_FILE:
MSMg01no345_b03.g1 PHD_FILE: MSMg01no345_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:27 2005
(526 letters)
>mm_chr8_101592980_101593905
Length = 926
Score = 928 bits (480), Expect = 0.0
Identities = 511/527 (96%), Gaps = 12/527 (2%)
Strand = Plus / Plus
Query: 1 actcccccaacttgtagtggctatctaagcctccaacattagcaggctttctttgagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcccccaacttgtagtggctatctaagcctccaacattagcaggctttctttgagaac 260
Query: 61 acattggtccagcaatctaccaaaacaagactctttaccaaacaggctgaactgggcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acattggtccagcaatctaccaaaacaagactctttaccaaacaggctgaactgggcaac 320
Query: 121 atccatcactccctctatgaaaatccagagagaaaacagataccaaagaataaaacaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atccatcactccctctatgaaaatccagagagaaaacagataccaaagaataaaacaacc 380
Query: 181 cccaacatagaaaaacccagactttagcactgagacctctaatcaacaaaaacccataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaacatagaaaaacccagactttagcactgagacctctaatcaacaaaaacccataag 440
Query: 241 gctagatagacactggtgtaagaacataattaataacagctgggataatatgtctctatc 300
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 441 gctagatagacactggtgtaagaacataattaataacaactgggatattatgtctctatc 500
Query: 301 aatgcccaactcgcctaccacagcatataccaaatattccaacatagctgcagcacacac 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 aatgcccaactcgcctaccacagcatatcccaaatattccaacatagctgcagcacacac 560
Query: 361 acacacacacacacacacacacatacacacacacaaagaacttaaaaccaactatgtgaa 420
||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 561 acacacacacacacacacacaca-a---------aaagaacttaaaaccaactatgtgaa 610
Query: 421 gatgatagaggttcttaaagaggaaatgaataaatgccttgaagcaagctaggaaaaaaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 611 gatgatagaggttcttaaagaggaaatgaataaatgccttgaagcaagctag-aaaaaaa 669
Query: 481 c-aaacaaacaattggaggaaatgaatagatcacttanagaaagtta 526
| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 670 ccaaacaaacaattggaggaaatgaatagatcacttaaagaaagtta 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
