Query= MSMg01no345_c07.b1 MSMg01no345_c07.b1 CHROMAT_FILE:
MSMg01no345_c07.b1 PHD_FILE: MSMg01no345_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:32 2005
(581 letters)
>mm_chr8_58975954_58976930
Length = 977
Score = 627 bits (324), Expect = 0.0
Identities = 348/358 (97%), Gaps = 4/358 (1%)
Strand = Plus / Minus
Query: 5 gaattcattgtttttcactgatttctgacattgtggaaacaaacacaactatgtttctgg 64
||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 354 gaattcattgtttttcagtgatttctgacactgtggatacaaacacaactatgtttctgg 295
Query: 65 cttctgacaccattgtcaggttttgttgtttgtttgtttgtttttgttgttattgttcat 124
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 294 cttctgacaccattgtcaggttttg----ttgtttgtttgtttttgttgttattgttcat 239
Query: 125 tcttttaaagaattttctgggtctttccttttgttgtgcccttccctcagccttgagcag 184
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 238 ccttttaaagaattttatgggtctttccttttgttgtgcccttccctcagccttgaggag 179
Query: 185 gctaaacagaccttaattttttgccacagtcagtcttccactgacctagcctacctaggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gctaaacagaccttaattttttgccacagtcagtcttccactgacctagcctacctaggg 119
Query: 245 tggaagacttctgccttgccacacctgcagtgtcctgcaggagcagactgcttgctgtgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tggaagacttctgccttgccacacctgcagtgtcctgcaggagcagactgcttgctgtgc 59
Query: 305 tttctttgcaacagaatccagctgaaagaaaggatgggcctttgggtttcccctaaat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tttctttgcaacagaatccagctgaaagaaaggatgggcctttgggtttcccctaaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 977
Length adjustment: 10
Effective length of query: 571
Effective length of database: 967
Effective search space: 552157
Effective search space used: 552157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no345_c07.g1 MSMg01no345_c07.g1 CHROMAT_FILE:
MSMg01no345_c07.g1 PHD_FILE: MSMg01no345_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:32 2005
(283 letters)
>mm_chr8_58802865_58803547
Length = 683
Score = 503 bits (260), Expect = e-147
Identities = 277/283 (97%)
Strand = Plus / Plus
Query: 1 cctgtctcctttatttatccaattataatcagtaactagttccaccatggcttctaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtctcctttatttatccaattataatcagtaactagttccaccatggcttctaggca 260
Query: 61 gctagcttacctgttcagctttaattcttagtaagaacaacagatttactaaaaacaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 gctagcttacctgttcagctttaattcttagtaagaacaacagatttactaaaaacagat 320
Query: 121 aggaaggtggatctccgtactagttactgaaaaataaggatgcctgtgaaagtgtcttan 180
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 321 aggaaggtggatctccgtactagttactgaaaaataaagatgcctgtgaaagggtcttaa 380
Query: 181 aataaaacaatgtaggttgccacatccatttcctcttccttaaactttgctgtacatcat 240
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aataaaacaatgtaagttgccacatccatttcctcttccttaaaatttgctgtacatcat 440
Query: 241 ttgccagtatttgacagcattttcccatactaggacattcaaa 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgccagtatttgacagcattttcccatactaggacattcaaa 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
