NNNTTCTNNTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCTTTTCTCCTGCCTACAACCCAGTTGGCATGCATG
GTTCCCTGCTCAGACAGGGATTCCACGCTGAGGATGCTGGAACTCAGCAT
GCTTAAAGAAGCAAGTGAAGGAGGAAGCCCAAACCTGACCAAAAATTAAT
CATGTTCATGTTTTAAAGGCCACAAAGGCCGGGTGTGGTGGCACACGCCT
TTAGTCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGATCGAGG
CCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGA
AACCCTGTCTCANAAACCANAAAAAAAAAAAAAAAAAAAAAAAGCCACAA
AGAAGGAGGGAATGCACTTCAAGTCTGGTAAGGAACTCCTAACCTGGACA
CACAAGGAAAGCTCCCAAGTCTGACAAAGCTTCAAATGACCCCGTCTAAA
ACCAAGCCCAGGGTGGAAACAGCATTACTCCAAGGGAGACTCATAAAGGG
CTATTTCGCCTCCGGATTCAAGACTGCACAGTGGAACCACAGGGATGTCA
TTATAGCACTGTTATCCGAAGCACAAAAACCCCCAAGCCCGGACATGGAG
AACCTAAAACTTCCCCTGGTGGAGAAGGGGGGACCTACTGGCCCGCTTTG
AAAAATTGGCAGTCCCTCCCCCTCCCAGGAAGAAAAACCTCCAGAAAAAA
TCTCCCACGCTCGCTCCCCA

TTTCTTCTTCGATGATATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCAGTGTGAGTT
ACATAGCAAAGTCCTATTTTTAAAAAAAAAATACAGTGATTTTTTTAAAG
CCATAAGTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCTTGCAATG
ACACTAGGTGTGAAGAATTTGAGAGACACTGAGAGATGTGTGGTACTGTC
TTGATGGAGCCATTGAACTCTATGATAAAATGGAGGGGTCACAAGCTAAG
AACAGCAGGTGGCCTCCCGGAACTGGGAGAGGCAGGTAAATAGTCCCCCC
AACCCCCCAAACCAGCGCAAGAAGCCACCCTGGTCAGACTGACTTTTGCA
CGTGAGACCCAGGTTGGCCTCTGTCCTCCAGGCACTAAGGAACACATGGG
TGTAGCTTGGAGTGGTGGAAGTTTGTGTTAGGTCAAAGCAACAATGGTAT
TGCTGAGCTCCATGCTCCATCACCTCCCTGTACTCAAACTCTCAGTCCTG
TTGACCAATATTCTTGTCTCCCACTCCGCTTCCCATGGTCCCCTTGGTAT
AAGTACTTGTCTCTGCTTCTCTTTATGTATAAAAGTTTTCTATCTCTCCC
TCCATATCGTTAGCTTCTTTTCTTTTCACTACCTTTATACTTGGTAATAT
GTTCTCTCTATCTTCTTCCATTACATTCATTTCCATAATTATTTCGCATC
TTCCTTTCCTCTCTTTTATTACTTTN

Query= MSMg01no345_c18.b1 MSMg01no345_c18.b1 CHROMAT_FILE:
MSMg01no345_c18.b1 PHD_FILE: MSMg01no345_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:34 2005
         (480 letters)



>mm_chr8_122030511_122031390
          Length = 880

 Score =  851 bits (440), Expect = 0.0
 Identities = 464/477 (97%), Gaps = 9/477 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcttttctcctgcctacaacccagttggcatgcatggttccctgctcagacag 63
           ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattctcttttctcctgcccacaacccagttggcatgtatggttccctgctcagacag 263

                                                                       
Query: 64  ggattccacgctgaggatgctggaactcagcatgcttaaagaagcaagtgaaggaggaag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggattccacgctgaggatgctggaactcagcatgcttaaagaagcaagtgaaggaggaag 323

                                                                       
Query: 124 cccaaacctgaccaaaaattaatcatgttcatgttttaaaggccacaaaggccgggtgtg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccaaacctgaccaaaaattaatcatgttcatgttttaaaggccacaaaggccgggtgtg 383

                                                                       
Query: 184 gtggcacacgcctttagtcccagcactcgggaggcagaggcaggcggatttctgagatcg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtggcacacgcctttagtcccagcactcgggaggcagaggcaggcggatttctgagatcg 443

                                                                       
Query: 244 aggccagcctggtctacagagtgagttccaggacagccagggctatacagagaaaccctg 303
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 444 aggccagcctggtctacagagtgagttccaggacagccagggcta--cagagaaaccctg 501

                                                                       
Query: 304 tctcanaaaccanaaaaaaaaaaaaaaaaaaaaaaagccacaaagaaggagggaatgcac 363
           ||||| ||||||       |||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tctcaaaaacca-------aaaaaaaaaaaaaaaaagccacaaagaaggagggaatgcac 554

                                                                       
Query: 364 ttcaagtctggtaaggaactcctaacctggacacacaaggaaagctcccaagtctgacaa 423
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 555 ttcaagtctggtaaggaactcctaacctggacacacaagaaaagctcccaagtctgacaa 614

                                                                    
Query: 424 agcttcaaatgaccccgtctaaaaccaagcccagggtggaaacagcattactccaag 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 agcttcaaatgaccccgtctaaaaccaagcccagggtggaaacagcattactccaag 671


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space:   408900
Effective search space used:   408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)