XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCCATTT
AAGAACACATATACATTGGTTTTATATTTTTGTTAATCTCACATATTATC
TTAGTGATTGTGGCTTTCATTATCTGTTGCTGTGTAATTCTTCCATTGTA
TTTTTAAATGCATTATTATGAGTTGATATACTCACCTTTAAATCACCCCA
GGCCACTAACAGTAACACTTGGTCATTTAACTTCACTGGAGAAATCTGAG
GGATGCTTCCTGGGTTTCAGCATCTTTCTAAACTGGCTGTTTGCAATATG
GACTCTTTGTTGACTTGAGATATTTCTGGGGTTGCCAGTGGTAGTACCCA
GGCTTTGCAGCAGTTCTTTTACCAGATTTGGATAATTTTTTCCCTTGAAT
GTAAAAACTAAGGAATCAAAGACCGGGCTCATGGGCAGACATGCCCAGTT
CTTTTAAACTCTATAATTGTGTGTTACAGCTGCCTGGTCTACCCTGACCT
TAGTTCTCAGGGGCCTAGCTGGCCTTTCTGCCTTTCTTTCTGTATTGTGA
TGCATACTGCTTAAAGCTGGGAGATGNNGAATCCTGGGCAACCTCAGGAC
TTACTTCCTTATTTCCCTTCTTTTAGGGGATTAGAAGCCAGTATTTCCTG
CCCATCCAGTGTTTGAAAATTCTTTTTAAATATCACCCCTGGCTTGCTGT
TTGTTGTTGCTTGGTTTCAT

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTACACAGAGAAACGCTGTC
TGGAAAAAACAAAAACAAACAAACAAACAAAAAATAACAAAAAAAAAATT
AAAGAAAGAATCTGAAGCCAACATCAGAAGATGGAAAGAACTGCCACCAT
CGTCTGTTTGTAGAATTAATATTGTGAATGACTATTCTACGAAAGCAAAC
TATAGATTCAGAAAACCCCCAGGAAAATGCCCATTCTATTCTTTACAGAA
TGTTTTTAGCAATGAAATTTCACATGAAGAAACAAAATGTCCAGGATAAA
CAAATAAATCCTCACCAATATAAGAACTGTTGAATTATCACAATCTCTGA
CTTTAAGTTATACTACAGAGTTATAGCGCTAAAACAGCATGGTACTAAAA
TCAAAATAATACTTTTGTGAATGGAGCAAACTTCAGAATCCATATATAAA
TATATATTCCTAAAGCAACCTGATTTTTGACAAACAGTTAAAAAAACAAA
GAGGAGAAAGAATAGCATCCATAAATATTGCTTATTAAATTGTATAAAAA
CAGATCAAAGGATGGAACTGAATTCTTATCTCTCATGCTACACAAACTCC
AATTCCTATTTAAATCGGAAACCTTTAACATAAATACCTTAAAACCATTT
AATCCCTCTAAAAGGACAAATTAACTGCATTTTGN

Query= MSMg01no345_m07.b1 MSMg01no345_m07.b1 CHROMAT_FILE:
MSMg01no345_m07.b1 PHD_FILE: MSMg01no345_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:17 2005
         (595 letters)



>mm_chr8_50594144_50595140
          Length = 997

 Score = 1077 bits (557), Expect = 0.0
 Identities = 583/593 (98%), Gaps = 2/593 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctccatttaagaacacatatacattggttttatatttttgttaatctcacatatt 64
           |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 797 gaatcctccatttaagaacacatatacattggttttatatttttgttaatatcacatatt 738

                                                                       
Query: 65  atcttagtgattgtggctttcattatctgttgctgtgtaattcttccattgtatttttaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atcttagtgattgtggctttcattatctgttgctgtgtaattcttccattgtatttttaa 678

                                                                       
Query: 125 atgcattattatgagttgatatactcacctttaaatcaccccaggccactaacagtaaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 atgcattattatgagttgatatactcacctttaaatcaccccaggccactaacagtaaca 618

                                                                       
Query: 185 cttggtcatttaacttcactggagaaatctgagggatgcttcctgggtttcagcatcttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cttggtcatttaacttcactggagaaatctgagggatgcttcctgggtttcagcatcttt 558

                                                                       
Query: 245 ctaaactggctgtttgcaatatggactctttgttgacttgagatatttctggggttgcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctaaactggctgtttgcaatatggactctttgttgacttgagatatttctggggttgcca 498

                                                                       
Query: 305 gtggtagtacccaggctttgcagcagttctttt--accagatttggataattttttccct 362
           |||||||||| |||| |||||||||||| ||||  |||||||||||||||||||||||||
Sbjct: 497 gtggtagtactcagggtttgcagcagtttttttttaccagatttggataattttttccct 438

                                                                       
Query: 363 tgaatgtaaaaactaaggaatcaaagaccgggctcatgggcagacatgcccagttctttt 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgaatgtaaaaactaaggaatcaaagaccgggctcatgggcagacatgcccagttctttt 378

                                                                       
Query: 423 aaactctataattgtgtgttacagctgcctggtctaccctgaccttagttctcaggggcc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aaactctataattgtgtgttacagctgcctggtctaccctgaccttagttctcaggggcc 318

                                                                       
Query: 483 tagctggcctttctgcctttctttctgtattgtgatgcatactgcttaaagctgggagat 542
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 317 tagctggcctttctgcctttctttctgtattgtgatgcatactgcttagagctgggagat 258

                                                                
Query: 543 gnngaatcctgggcaacctcaggacttacttccttatttcccttcttttaggg 595
           |  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggggaatcctgggcaacctcaggacttacttccttatttcccttcttttaggg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 997
Length adjustment: 10
Effective length of query: 585
Effective length of database: 987
Effective search space:   577395
Effective search space used:   577395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)