XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACT
TTGCTATGAATTATTGCTTCCTAAACTACAAATGGACAGTCTACATCAGC
AGATCAATTGATGGAGCATGAGAAATTTCTACTTTTTTTCATCCAATGTT
TTCCCACTAGGTAACATATTCTATATTTTGTAGTTGCCTGTAGAGTGAAC
ATGATGTGGAAACACTGGGGAGTAGAGGTTATAAAACATGAAGAAATATA
GTAGCTATCATCTGGAATTTTGGTGAAACTTTTCCCAGTACCTAATTACA
TTATTTGCTCAACAAATATTTATTAAATGTCTGCTGTGTGCCTGGTAGTA
AAGGGCCTGAGATGAATCAGATAAAATCCCCTGCTGTCTCGAAATCCCCA
ATCTCATTGAGGTCAAAGTGGTTTTGTCAACAAATCCTGAGCGATGTGTA
GAGTATGTACTTCTGTAGAGATAGGATTATACAATGTAATTAGTCATGAT
ATACAAGAGTAATAGAAAGGTCCAGGAGGCATCTTTTAAGGGTGACTCTG
GGATGTATCCTTGAGCCAGGAGAAGTTCCCCTTCCATGATAGAAATAATA
GCTGTTTGAGGCAAGGAAACATTGGATGGAAAGTCAAGGCAGGTGGAACA
GCAATGAGCTCTTTACAAAGAAGTGAGTTCTCCACGGTGGGCTGAACTGG
TTCATTTTGGACAACAGGCTTAGTTAACGGG

CGGGGATGGGAGGATGCTCTAGGAGGNAGAGAGGAGNGGNGGGAGAGGAG
GGAGCAGAGAGAGGGNNGGGAGNGGGGGTGGGGGGGGGAAGAGGGGCGAA
ATGGAATAAAGGGGGGTAGGGTCCCGGGGGGNGGGGGCCCCGGCCCCGGG
GGTTTTCCCTTCCAAAACATTTTTTTAGGGTGGGAACCTATTAGAAAGGG
TTTCCCGGGCGGGAAAATTTCCTCTTAAAACAAATAAGGGAGGCTTTAAA
AGGGGGGTTTTTTTCTTAAGGCCAAGGGGCCCACTAACAAAGTTCCTTAC
AAAAGGGGTAATTTTCGGGGCCAAAAATTAAAAAAACTCTTTGGGGCCCT
CCCCTTAAAAAAAAAAAAAAATCCCCCCCCCCTCTTTTTTTAAAAAAAAA
TACACTTTTTTTGGGGAGAATCATAAAGGGGGGGGGGGAGACACCAAAAA
AAAAAAAAAATTTTTTTTTGTTCCAAAAAAAAGGGGGCTCTTTTTTTTTT
AAAAAGGGGGGGGGGGGGGGGACCCCCCCCCCCGGGGGGGGGGGAAAAAA
AAAAAAAAGAAAGTGGGCGGGGGGGGGGTGTTTTTTT

Query= MSMg01no346_a04.b1 MSMg01no346_a04.b1 CHROMAT_FILE:
MSMg01no346_a04.b1 PHD_FILE: MSMg01no346_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:35 2005
         (541 letters)



>mm_chr8_105161639_105162580
          Length = 942

 Score =  797 bits (412), Expect = 0.0
 Identities = 451/464 (97%), Gaps = 1/464 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactttgctatgaattattgcttcctaaactacaaatggacagtctacatcagca 64
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaattctctttgctatgaattattgcttcctaaactacaaatggacagtctacatcagca 405

                                                                       
Query: 65  gatcaattgatggagcatgagaaatttctac-tttttttcatccaatgttttcccactag 123
           |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 404 gatcaattgatggagcatgagaaatttccacttttttttcatccaatgttttcccactag 345

                                                                       
Query: 124 gtaacatattctatattttgtagttgcctgtagagtgaacatgatgtggaaacactgggg 183
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 344 gtaacatattctatattttgtagttgcctgtagagtgaacatgatgaggaaacactgggg 285

                                                                       
Query: 184 agtagaggttataaaacatgaagaaatatagtagctatcatctggaattttggtgaaact 243
           |||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||
Sbjct: 284 agtagaggttataaaacatggagaaatataatagccatcatctggaattttgatgaaact 225

                                                                       
Query: 244 tttcccagtacctaattacattatttgctcaacaaatatttattaaatgtctgctgtgtg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tttcccagtacctaattacattatttgctcaacaaatatttattaaatgtctgctgtgtg 165

                                                                       
Query: 304 cctggtagtaaagggcctgagatgaatcagataaaatcccctgctgtctcgaaatcccca 363
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 164 cctggtagtaaagggcctgagatgaatcagataaaatcccttgctgtctcgaaatcccca 105

                                                                       
Query: 364 atctcattgaggtcaaagtggttttgtcaacaaatcctgagcgatgtgtagagtatgtac 423
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 104 atctcattgaggtcaaagtggttttgtcaacaaattctgagcgatgtgtagagtatgtac 45

                                                       
Query: 424 ttctgtagagataggattatacaatgtaattagtcatgatatac 467
           || | |||||||||||||||||||| ||||||||||||||||||
Sbjct: 44  ttttatagagataggattatacaatttaattagtcatgatatac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space:   494892
Effective search space used:   494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)