GCGCTATACGACTCACTATTTCCAGAGGATCCGCGGAATTCTGTCACTTT
CCGTGGGTACATCATCCATCCTTAGTTAATGCGATCAAGGCAGCTCCCCA
CAGGTATGCCCACAGGCCCATCTCCCAGATGATTCTAGACCCTGTCAAGT
TGACAATTAGCACTAACCATCACAGGAGCCTAGCAGAAGTGAATGCCCTC
CCATGAGGATAGGGACGAGCTAGAGGGGCCCTGTAGGCTTCTATTTGGAG
AACCAGGGGTGGGGGAGACCATGAAATGAGAAGAGAGATTCTCTGAAGGC
CTACTACCTGCCACAACACAGCGGGCAAGAAACTTCCCCTCTCCCATCTA
CCCTGATGACTGACATCAGTTGACACAAGGTTACCCACCTCTGCCAGAAG
AGGAGGAGAAGGGATGCCCAGATGAGAAGGCCCCCCTCCTATCCCCTGAG
AGGTCTCCCTCCTGTCCCCTGAGGTGCCTCCCTCTTGTCTCCTCAGGAGC
AGTCCAGAACAGGGCTTCTAACCATGGATCAAAATCCTGACCCACCCTTG
GGCCATTTCTGACTCTCACAGTCTCCTGTGCTCCCCCCAGTAAGAGTTGG
AAGGAAGCTCCAACATATTTTTAACCCTGGAGGGAGAATGGTCAACCGGT
TGGATCCTTTTTCCAACAGCTCTGATTTTCCCGGACAAAGCAGCCTTTTA
TCTCTATGGGTAGTTCTTCTATTCCTAGTTTCCTCCCTCTCCCCCTGGTC
GTTTTTTCCTTAGCCGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCTGTCAGTGCAAACATGTGTGTCTCTGCTTCTATATGC
ATTTCTTCTTCTTCTTCTTTTTTAATTTAAAATTTTAAGTTTATTCTTCT
CTCATATATTGCATTCTGACAGCAGTCTCCCTTCCCTTGACTCCTCCCAA
TGCCTGCCCCAACCTCCCCCTTCACCCCCTCTTCTCTTCCATTTCTCTTC
AGAAAAGAGCAGGCTTCCCATGGCTATCAACCCATGATGACATTTCAAGT
TGCAGGAGGACTAGACACTTTCCCATGTATTAAGATTGGATGAGGCAACC
CAGTAGTAGGAAAAGGGTCCCAAAAGATGAAAGAGTCAGAGACAGCCCTG
CTCCTACTGTTAGGAGTCTGACAAGAAGAATAAGCTACACAACTGTAACA
TATGTAGTTAGTCCCATGCAGGCTCCCTAGTGGTTGGTTTAGTCTCTATG
GGCCACACTTAGTGCAGGTTAGTTGATTCTGTGGGTTTTCTTGTGGTTCC
CCCTCCCCTCTCTCTCGTTTTGCATGTTAGCGCCGTAATTTACTGCTTTG
GTCCCTTTATATTACTCTACTATTCGACCACACTCATTATTTTTGTCCCG
GTCCACTACTTAATACTATCTTTTTTAAAAATCCTTCTCACTGCGACCCG
TATTTGTCCCACATTTCTTTTTTCTTTCCTTTTCACCCCTTTTTTCACAA
ATTTTCTCTCG

Query= MSMg01no346_k20.b1 MSMg01no346_k20.b1 CHROMAT_FILE:
MSMg01no346_k20.b1 PHD_FILE: MSMg01no346_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:26 2005
         (441 letters)



>mm_chr8_89647218_89648058
          Length = 841

 Score =  845 bits (437), Expect = 0.0
 Identities = 440/441 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggtacatcatccatccttagttaatgcgatcaaggcagctccccacaggtatgcccacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ggtacatcatccatccttagttaatgcgatcaaggcagctccccacaggtatgcccacag 701

                                                                       
Query: 61  gcccatctcccagatgattctagaccctgtcaagttgacaattagcactaaccatcacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gcccatctcccagatgattctagaccctgtcaagttgacaattagcactaaccatcacag 641

                                                                       
Query: 121 gagcctagcagaagtgaatgccctcccatgaggatagggacgagctagaggggccctgta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gagcctagcagaagtgaatgccctcccatgaggatagggacgagctagaggggccctgta 581

                                                                       
Query: 181 ggcttctatttggagaaccaggggtgggggagaccatgaaatgagaagagagattctctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggcttctatttggagaaccaggggtgggggagaccatgaaatgagaagagagattctctg 521

                                                                       
Query: 241 aaggcctactacctgccacaacacagcgggcaagaaacttcccctctcccatctaccctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaggcctactacctgccacaacacagcgggcaagaaacttcccctctcccatctaccctg 461

                                                                       
Query: 301 atgactgacatcagttgacacaaggttacccacctctgccagaagaggaggagaagggat 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atgactgacatcggttgacacaaggttacccacctctgccagaagaggaggagaagggat 401

                                                                       
Query: 361 gcccagatgagaaggcccccctcctatcccctgagaggtctccctcctgtcccctgaggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gcccagatgagaaggcccccctcctatcccctgagaggtctccctcctgtcccctgaggt 341

                                
Query: 421 gcctccctcttgtctcctcag 441
           |||||||||||||||||||||
Sbjct: 340 gcctccctcttgtctcctcag 320


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)