Query= MSMg01no347_c09.b1 MSMg01no347_c09.b1 CHROMAT_FILE:
MSMg01no347_c09.b1 PHD_FILE: MSMg01no347_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:02 2005
(583 letters)
>mm_chr8_109247851_109248833
Length = 983
Score = 601 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Minus
Query: 5 gaattcattattgccggtttggtaagcttctccattgtgaattcccatggaaagggaaaa 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gaattcattattgtgggtttggtaagcttctccattgtgaattcccatggaaagggaaaa 260
Query: 65 ccttaagttccctcacaattagtgctttgctaaagtagctgacagctgagagtgatggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccttaagttccctcacaattagtgctttgctaaagtagctgacagctgagagtgatggtg 200
Query: 125 ttcaaccgtgcttgggtaattttcctccccaggggacattttgaaatgcctgcaggacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttcaaccgtgcttgggtaattttcctccccaggggacattttgaaatgcctgcaggacat 140
Query: 185 ttttggttgtcataattgggggggtaacaaaggcatttagtgggtagaggtcacagatgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttttggttgtcataattgggggggtaacaaaggcatttagtgggtagaggtcacagatgg 80
Query: 245 tactaaatatcctacaaagaacaagacaaccacaccgaagaacacacttatctagatcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 tactaaatatcctacaaagaacaagacaaccacaccgaagaacacacttatctagatcaa 20
Query: 305 atgtcaattttgccaagat 323
|||||||||||||||||||
Sbjct: 19 atgtcaattttgccaagat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c09.g1 MSMg01no347_c09.g1 CHROMAT_FILE:
MSMg01no347_c09.g1 PHD_FILE: MSMg01no347_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:02 2005
(533 letters)
>mm_chr8_109080610_109081542
Length = 933
Score = 977 bits (505), Expect = 0.0
Identities = 526/533 (98%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 1 acttaattgagttggttatattaaattagaacgttcctgaccgtgcccgggcaagagagc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 acttaattgagttggttatattaaattagaacgttcctgaccatgcccgggcaagagagc 260
Query: 61 ctaagacagaatgatgtctttgaagtgaagcccaaaatttttcttttgttagcaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctaagacagaatgatgtctttgaagtgaagcccaaaatttttcttttgttaacaattttc 320
Query: 121 tattgttttatgtatgtgggtgttttccctgcatggacatctctgtaccacgtgtatacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattgttttatgtatgtgggtgttttccctgcatggacatctctgtaccacgtgtatacc 380
Query: 181 tggtgcaccttttgcccaaggaggcaatagaagaaagtgttggatccccggacctggggt 240
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tggtgctccttttgcccaaggaggcaatagaagaaagtgttggatccccggacctggg-t 439
Query: 241 tatagagtgttacaagttgccctatgggtgctggaaatcaaacccaggtcctcctgaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatagagtgttacaagttgccctatgggtgctggaaatcaaacccaggtcctcctgaaga 499
Query: 301 gaagtcagcattctttaccatttagccatctctctccaggcccacaaaattgttcttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagtcagcattctttaccatttagccatctctctccaggcccacaaaattgttcttttc 559
Query: 361 agaaaatacagagtatttttcaagatttatttattacatgtaagtacactgtagctgtcc 420
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 560 aaaaaatacagagtatttttcaagatttatttattatatgtaagtacactgtagctgtcc 619
Query: 421 tcagatactccagaagagggcatcagattttgttacggatggttgtgagccaccatgtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcagatactccagaagagggcatcagattttgttacggatggttgtgagccaccatgtgg 679
Query: 481 ttgctgggatttgaactcaggatcttcaaaagagcagtcggcgctcttaacca 533
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 680 ttgctgggatttgaactcaggatcttcagaagagcagtcggcgctcttaacca 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
