CTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTTAAGATTAACAAACCTCAGGACATACAGAACTTAACAGCGGA
TGTGGTCAGCATGACCCTGCTCTAAGTCAAATTATTTCTCTGTGTCAGTG
ACTGGTAGGTATGTTACAGCATTAATATAAAATAGCTGGCACGCATGAAA
CAAAACGGCTATGACTATGCTGCAGGGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTNNNNNNTNTNTNNTTTTTTTTCCTTTTTCTNTTTTTTTTT
TTTTTCCCCTTTTTTTTCCCTTTTTTTTTTTCCCTTTCTCCTTCCCCTCT
TCTTCTTTTTTCTCTTCCCCCCTTCTTCTCCCTTTTCCTTCCCCCCCCTT
TTTTTTTTTTTTCCCCCCCCCCCCCCCCCCCCTTTTTTTCCCCTTCCCTT
TCCTTTCCCTCTTATACCCTCCTTCCCCCCTCCTCTTTTTTCTCCCTTCT
TTATTCCTTTTCCTTTCCCTTCCCCTTTCCCCTTTTTCCCCTTCCCTTCC
CCCTACTTTTTTTCCTCTCTCTATTTCTCTCCTCTCCCCCTCTCTATTCC
TATATTTTTTCTTTCTCCCCCCTCCTTTCCCCTTCTATCCCTTTTCCTTT
ACTCTTCTATTCCCCACCCCCCCTTCCCCTTATATTTCCCCTCTCCCCTC
TCCTCCTCCTTTTTTCTTTCTTCACCCCCTCTTCTCCCTTATTTTTCTCC
CTCCTTCCCCCCTTTTTTCTCCTCCCTCCCTCCTTTTTCCTCCTTCCCTT
ATTCCCCCTTTTTCCCCCCCTTATCTTCCCTTTCTTTCTTTTCTTCTCCC
C

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTAGCTTCACTTCCATGCCCAG
GCCTTGATCAGCACCCTACCCACCACTGTTTGACTTTCTGTTCTTAGTGC
TGTGATGGAGCAGCTGACAAAATAACTTAAAAAGCATCATGCTTGCTTGG
GTTTATGCTTTAAGAAGTGATACAGGGAGCTAGAGAGATATCTCCATGGT
TAAGACCATGTGCTACTCTTTCAGAGGACCTGAGTTCAGTTTCTAGCATC
CACATCATGTGGCTCGCAACTTCCTATAACTTCACCTCCAGGTATCCAAC
GCCTCTGGCCTCTGCAGACACCAGCACTGAGGAGTGCATGCCCAAACACA
CACACACTGCTAAAACTAACTTAAGTAAAGACTTTTTGAAAAATAAATGG
TATAGTCAGTCTATCATAGCAGAGAAGGCATACAGGCCATGAGTATGAGC
TGGTTGGTCATATTTTATACGTAGTTAGGAGGCAGAGAAAAAGAGGAATA
CCTCCTTTTTAAAAATTCAGTTTAGAACCATAGTATATGGTTTACACTCA
GGATAGATCTTTTCTCCTCAGTCAAACCTCTCTGCAAACACTCTTGGAGG
CATATCCAGAGTCCCACTTCCTGGTGATTTACAAGTCCAGCCATGTAAAC
CATGAAGATTTGCCATTATACCCACATACTACAGTTGAACCCCTCCCTTT
CAATTTCCN

Query= MSMg01no347_c20.g1 MSMg01no347_c20.g1 CHROMAT_FILE:
MSMg01no347_c20.g1 PHD_FILE: MSMg01no347_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:04 2005
         (521 letters)



>mm_chr8_80661369_80662289
          Length = 921

 Score =  984 bits (509), Expect = 0.0
 Identities = 518/521 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctagcttcacttccatgcccaggccttgatcagcaccctacccaccactgtttgactttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagcttcacttccatgcccaggccttgatcagcaccctacccaccactgtttgactttc 260

                                                                       
Query: 61  tgttcttagtgctgtgatggagcagctgacaaaataacttaaaaagcatcatgcttgctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttcttagtgctgtgatggagcagctgacaaaataacttaaaaagcatcatgcttgctt 320

                                                                       
Query: 121 gggtttatgctttaagaagtgatacagggagctagagagatatctccatggttaagacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtttatgctttaagaagtgatacagggagctagagagatatctccatggttaagacca 380

                                                                       
Query: 181 tgtgctactctttcagaggacctgagttcagtttctagcatccacatcatgtggctcgca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgctactctttcagaggacctgagttcagtttctagcatccacatcatgtggctcgca 440

                                                                       
Query: 241 acttcctataacttcacctccaggtatccaacgcctctggcctctgcagacaccagcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttcctataacttcacctccaggtatccaacgcctctggcctctgcagacaccagcact 500

                                                                       
Query: 301 gaggagtgcatgcccaaacacacacacactgctaaaactaacttaagtaaagactttttg 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gaggagtgcatgcccaaacacacacacactgctaaaaataacttaagtaaagactttttg 560

                                                                       
Query: 361 aaaaataaatggtatagtcagtctatcatagcagagaaggcatacaggccatgagtatga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaaataaatggtatagtcagtctatcatagcagagaaggcatacaggccatgagtatga 620

                                                                       
Query: 421 gctggttggtcatattttatacgtagttaggaggcagagaaaaagaggaatacctccttt 480
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 gctggttggtcatattttatacgtagttaggaggcagagagaaagaggaatacctccttt 680

                                                    
Query: 481 ttaaaaattcagtttagaaccatagtatatggtttacactc 521
           |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaaatttcagtttagaaccatagtatatggtttacactc 721


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)