Query= MSMg01no348_e20.b1 MSMg01no348_e20.b1 CHROMAT_FILE:
MSMg01no348_e20.b1 PHD_FILE: MSMg01no348_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(523 letters)
>mm_chr8_113118940_113119862
Length = 923
Score = 967 bits (500), Expect = 0.0
Identities = 515/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaatcccccctctgcttccactttccagtccccaagcactggaattatataat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gaattcttaatcccccctctgcttccactttccagtccccaagcactggaattatataat 784
Query: 65 ttgtaccaccactatgctcagccttagctctttttatttattttta-ttttttatttaaa 123
||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 783 ttgtatcaccactatgctcggccttagctctttttatttatttttatttttttatttaaa 724
Query: 124 gacagggtgtatcactatgcattttaaaatcctcctgcctcattatctcacaatcaatca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gacagggtgtatcactatgcattttaaaatcctcctgcctcattatctcacaatcaatca 664
Query: 184 cagagattatattatagtattagctgtctagagttattgttgagagatcaagttggatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagagattatattatagtattagctgtctagagttattgttgagagatcaagttggatga 604
Query: 244 gctgtgtaatgggcatatactaggcacacaccaatattctttttcatgtcatcatggtag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gctgtgtaatgggcatatactaggcacacaccaatattctttttcatgtcatcatggtag 544
Query: 304 tagctgacactgtgatgtttcatatgaggtgaggagatgcagctgtctgctacagcattt 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 543 tagctgacactgtgatgtttcatatgaggtgaggagatgcagctgtctgctacagcatct 484
Query: 364 gattggagacacccttgctggtcctaccttgcacccacgtcgcccgtgttcattatgaga 423
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 483 gattggagacacccttgctggtcctaccttgcacccacgtcgcctgtgttcattatgaga 424
Query: 424 atgcgccgcgtggcttgagtttgatacacaacggggccaaagggaagatgctcttggtcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgcgccgcgtggcttgagtttgatacacaacggggccaaagggaagatgctcttggtcc 364
Query: 484 agggaaatctccagggcctgacaacagccactgaggagga 523
||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agggaaatctccagggcctgacaacagccactgaggagga 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_e20.g1 MSMg01no348_e20.g1 CHROMAT_FILE:
MSMg01no348_e20.g1 PHD_FILE: MSMg01no348_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(441 letters)
>mm_chr8_112942082_112942922
Length = 841
Score = 743 bits (384), Expect = 0.0
Identities = 426/440 (96%)
Strand = Plus / Plus
Query: 1 accccctgtgctgctctccagcccctccccctgtggggtcatctccccccacagcactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accccctgtgctgctctccagcccctccccctgtggggtcatctccccccacagcactgt 260
Query: 61 gagcataccactagccttggagacgcaggtcactggagcacatcgatccatagtttacat 120
|||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 261 gagcataccactagccttggagacacaggtcattggcgcacatcgatccatagtttacat 320
Query: 121 ctccgtcttcgggagccaggaagcccctctggtgagtcagttttcagaatcgccatcaag 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccgtctttgggagccaggaagcccctctggtgagtcagttttcagaatcgccatcaag 380
Query: 181 gtcacatgctccctactgtagaggcttttagcttcttccttggaggggtacgtcgtcatc 240
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 381 gtcacatgctccctaccatagaggcttttagcttcttccttggaggggtgcgtcgttatc 440
Query: 241 gtatatcctttggtttctacagttacaaggctttatgttttcattctgcagaagtaaaac 300
|| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtatcatttggtttttacagttacaaggctttatgttttcattctgcagaagtaaaac 500
Query: 301 acgtgtgttatattacctggagaaactgtatgcagatgcatccagaagttgtgaggtagt 360
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgtgttatattacctgaagaaactgtatgcagatgcatccagaagttgtgaggtagt 560
Query: 361 ataggaaggaattgttcttaagcctaacttgagtagcactattttcatatgcatatttca 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataggaaggaattgtccttaagcctaacttgagtagcactattttcatatgcatatttca 620
Query: 421 tattcatgcacacacacaca 440
||||||||||||||||||||
Sbjct: 621 tattcatgcacacacacaca 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
