Query= MSMg01no348_e23.b1 MSMg01no348_e23.b1 CHROMAT_FILE:
MSMg01no348_e23.b1 PHD_FILE: MSMg01no348_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(378 letters)
>mm_chr8_49300962_49301739
Length = 778
Score = 716 bits (370), Expect = 0.0
Identities = 373/374 (99%)
Strand = Plus / Plus
Query: 4 ggaattcccagcacgaaggcctggctcccagtgtgggtctcttccgggcaatcccattgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccagcacgaaggcctggctcccagtgtgggtctcttccgggcaatcccattgg 263
Query: 64 cctgtgcagggcatacacttgcctcccgtagcctcactagccaagtgcgggtggacaagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctgtgcagggcatacacttgcctcccgtagcctcactagccaagtgcgggtggacaagc 323
Query: 124 ttttctttaggacggaggccccacgacgttgcaggcaccagcaaggatggtacccaaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttctttaggacggaggccccacgacgttgcaggcaccagcaaggatggtacccaaaag 383
Query: 184 gatacctttgggggttggtgagaatagggtggtgttttattggattagacgggtcagaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gatacctttgggggttggtgagaatagggtggtgttttattggattagacgggtcagaca 443
Query: 244 tgaggtctgaggcatcagggagtgggtactctggatgcagaggggcctggatcctggacc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaggtctgaggcatcagggagtgggtactctggatgcagaggggcctggatcctggacc 503
Query: 304 agatgggacatggtttctgagggaggaggtctttggagtgcttttggacagagggggatt 363
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agatgggtcatggtttctgagggaggaggtctttggagtgcttttggacagagggggatt 563
Query: 364 gattagctcattca 377
||||||||||||||
Sbjct: 564 gattagctcattca 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_e23.g1 MSMg01no348_e23.g1 CHROMAT_FILE:
MSMg01no348_e23.g1 PHD_FILE: MSMg01no348_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:33 2005
(416 letters)
>mm_chr8_49414404_49415217
Length = 814
Score = 754 bits (390), Expect = 0.0
Identities = 410/418 (98%), Gaps = 5/418 (1%)
Strand = Plus / Minus
Query: 1 ttgcctcatgtcaaggtggatattggttaataagaagccgtgtgtgtctgggtcgggttt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ttgcctcatgtcagggtggatattggttaataagaagccgtgtgtgtctgggtcgggttt 743
Query: 61 aaagagttgtttttgaaatcatgatataaagggaagggaagatatatcatgatatttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aaagagttgtttttgaaatcatgatataaagggaagggaagatatatcatgatatttttc 683
Query: 121 ttctagtaatgtctcaaatacagagttgtctattgaacagcattga-tttgttgttgttg 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 682 ttctagtaatgtctcaaatacagagttgtctattgaacagcattgattttgttgttgttg 623
Query: 180 ttgttgttcttttgaggcgattcaaatggaaatttgacctaggggaaatactaatttttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttgttgttcttttgaggcgattcaaatggaaatttgacctaggggaaatactaatttttt 563
Query: 240 atgctacaaacatccggctatttgtttttattctaattccttagaacatc-ggaaacaca 298
|||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 562 atgctaca---atccagctatttgtttttattctaattccttagaacatcgggaaacaca 506
Query: 299 atcatgaatgatcacaaagacatgcttgtttgcccagacaaaacttaggtatactgtact 358
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atcatgaatgatcacaaagacgtgcttgtttgcccagacaaaacttaggtatactgtact 446
Query: 359 ccacaaactcctgttaaacagtgtggttgccctgatctttggggtatggaagacgaga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccacaaactcctgttaaacagtgtggttgccctgatctttggggtatggaagacgaga 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 814
Length adjustment: 9
Effective length of query: 407
Effective length of database: 805
Effective search space: 327635
Effective search space used: 327635
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
