XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGAAAGAAATAGAAAGGATGTTCAGCAGTAAATCTTTAAGATAACAACTA
CTACAGGTGAATAAAAACAATTACAAGAGTGCTTTGCCTGTATGTATATA
NNTGTATGTATTGTATGGTAATGGGTATGGCAATGGCATGGTAATGGTAT
TGTAAATNTTNTTGTGGGCNGNGCCCCCCCCCCCATAAAAAAAAAACCCC
CCCACAAAAAAAANNNTNTTTTTTTTTTTTTTTTTTTTTCTCTCCTTTGT
TGGGTGGACGGGCTTGTGGTTGGGGTTGTTTNATTTTTTTTTTTTTTTCT
TTTCTCCCCCCCCCCCCTTCCTTTNTTTTGGGGGNNGGTTGGAAAAAAAA
AAANCAATTAATTTGGGGGGTGGGGTGGNNTGTGTTCCCTCCACCACCCC
CCCNCCCTTNTTCTTTTTTTTTNTATTTTTTACCCGGCCCCCATACNNAC
AACAATAAAANNANATATAAAAATGNTAAAAAAATTAANNAAAAAAAAAA
TATAATCTNNNNACATCCCCCCC

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAATTCACTTCTTCACAAGGTTGAAAAATA
TTCTTAACGTTCATGAAGAAGCAAAATGAAAGATGATAGCCAAAACAAAT
CCCAGAGGGGGAGGATCTATTTGAGGATCATTGATGGGTGAATGACTTAA
GGACCTTAGGTTTATTAGATTCCATACTGTAAAGTTGGTGAACTGATATT
ACCCCTTGAAGCTTCTTTTTTTTAATATATATTTTTATTAGATACTTTAT
TTACAGTACAAATATTATCCTCTTTCCTAGTTTCCCCTCCAAAAATTCCC
TATCTCCTACCCTCTTCCCCTGATCCACAACCCACACACTCCCATTCTTG
GCCCTAGCATTTCTCTATATTGGGGCATACAACCTTCATAGGACCTAGGC
CCTCTCCTCCCATTTGTGACCAACTAGGCCATCCTCTGTTACATATGCAG
CTAGAGCCACACTCCCACCATGCATTTTCTTTGATTGGTGGTTTAGTCCC
AAGGATCTCTGGGGGTACTGTTTAGTTCATATAGTTGTTTCTTTTATAGG
GTTGCAACCCCTCTTAGCTCCTTGGTACTTTCTCTAGCCCCTTCCCGGGG
AATCTGTGTTCCGTCCCAAGGGCCCTGAAGCTTCTTTTTAAAGGAAATCT
TTCCAAACCCTCCTTTGTTTAAAAGTTTGGACTGGGGGG

Query= MSMg01no348_f24.g1 MSMg01no348_f24.g1 CHROMAT_FILE:
MSMg01no348_f24.g1 PHD_FILE: MSMg01no348_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:39 2005
         (466 letters)



>mm_chr8_53918894_53919759
          Length = 866

 Score =  764 bits (395), Expect = 0.0
 Identities = 407/411 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caattcacttcttcacaaggttgaaaaatattcttaacgttcatgaagaagcaaaatgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 caattcacttcttcacaaggttgaaaaatattcttaacgttcatgaagaagcaaaatgaa 352

                                                                       
Query: 61  agatgatagccaaaacaaatcccagagggggaggatctatttgaggatcattgatgggtg 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 351 agatgatagccaaaacaaatcccagaggaggaggatctatttgaggatcattgatgggtg 292

                                                                       
Query: 121 aatgacttaaggaccttaggtttattagattccatactgtaaagttggtgaactgatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aatgacttaaggaccttaggtttattagattccatactgtaaagttggtgaactgatatt 232

                                                                       
Query: 181 accccttgaagcttcttttttttaatatatatttttattagatactttatttacagtaca 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 231 accccttgaagcttcttttttttaatatatagttttattagatactttatttacagtaca 172

                                                                       
Query: 241 aatattatcctctttcctagtttcccctccaaaaattccctatctcctaccctcttcccc 300
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 171 aatattatcctctttcctagttttccctccaaaaattccctatctcctaccctcttcccc 112

                                                                       
Query: 301 tgatccacaacccacacactcccattcttggccctagcatttctctatattggggcatac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 111 tgatccacaacccacacactcccattcttggccctagcatttctctatattggggcatag 52

                                                              
Query: 361 aaccttcataggacctaggccctctcctcccatttgtgaccaactaggcca 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  aaccttcataggacctaggccctctcctcccatttgtgaccaactaggcca 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space:   390336
Effective search space used:   390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)