Query= MSMg01no348_i01.b1 MSMg01no348_i01.b1 CHROMAT_FILE:
MSMg01no348_i01.b1 PHD_FILE: MSMg01no348_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:48 2005
(547 letters)
>mm_chr8_106531699_106532644
Length = 946
Score = 1019 bits (527), Expect = 0.0
Identities = 536/539 (99%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgctgtacgcccccattttccactggttaaatgtctcccttttgcagtcatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttgctgtaagcccccattttccactggttaaatgtctcccttttgcagtcatt 264
Query: 65 ctaataatgaaatcggagactcatataaagccatacacaatgcctggtgcacccttctgt 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaataatgaaatcggagactcata-aaagccatacacaatgcctggtgcacccttctgt 323
Query: 125 cccagaaagctgtattagagaagacagaaaatataattagcatagctcagaaagctcaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cccagaaagctgtattagagaagacagaaaatataattagcatagctcagaaagctcaag 383
Query: 185 gtcctaagatttggccataataggtacacaataaataccttaccagacactattaaaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtcctaagatttggccataataggtacacaataaataccttaccagacactattaaaaac 443
Query: 245 tcttcctctgtgttggagggggaagcataaagacacacgaattgctgcaatacaaggttg 304
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 tcttcctctgtgttggagggggaagcagaaagacacacgaattgctgcaatacaaggttg 503
Query: 305 gttctaacagtccaatagtgggagatgctggaggcctttgagtagagaagggtgatagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttctaacagtccaatagtgggagatgctggaggcctttgagtagagaagggtgatagta 563
Query: 365 agttcagtgatacagatagagagccatgtgaaggtctgtcacttttgtggtcaacattcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agttcagtgatacagatagagagccatgtgaaggtctgtcacttttgtggtcaacattcc 623
Query: 425 ctaaacagaatgggtagctcggtgtagagtatgtgttaaaacatgaggcccagggttcca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctaaacagaatgggtagctcggtgtagagtatgtgttaaaacatgaggcccagggttcca 683
Query: 485 tgcccaacaccacaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgcccaacaccacaggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_i01.g1 MSMg01no348_i01.g1 CHROMAT_FILE:
MSMg01no348_i01.g1 PHD_FILE: MSMg01no348_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:49 2005
(450 letters)
>mm_chr8_106691118_106691967
Length = 850
Score = 801 bits (414), Expect = 0.0
Identities = 429/434 (98%)
Strand = Plus / Minus
Query: 1 atggggtcatggtaaggtttgaacatctgcccagagtccatgagttagaattcctaatgc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atggggtcatggtaaggtctgaacatctgcccagagtccatgagttagaattcctaatgc 375
Query: 61 aagaggattgaaaggtgggtgactttaagagctgcctgggctgttatggagggagccagg 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 374 aagaggattgaaaggtgggtgactttaagagctacctgggctgttatggagggagccagg 315
Query: 121 ccactagagcaccatccttagaagctctcctcccttactctcttcacccacgggatactt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ccacgagagcaccatccttagaagctctcctcccttactctcttcacccacgggatactt 255
Query: 181 ggaaacatactatgaagcaacacaaagcacctcccaacccccgctcccaaagcgtggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggaaacatactatgaagcaacacaaagcacctcccaacccccgctcccaaagcgtggccc 195
Query: 241 ttgatcttagtcttcagagccttcagagacccaagccaaatgcatttctgtccactataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttgatcttagtcttcagagccttcagagacccaagccaaatgcatttctgtccactataa 135
Query: 301 attaccagtctgtggtatagcattattcaatggactatggggacttctcaggtcagtgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 attaccagtctgtggtatagcattattcaatggactatggggacttctcaggtcagtgca 75
Query: 361 ctgagaacctccaaaggctgactgtccaggcttaaccctagagtcacagtatacttcagg 420
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 74 ctgagaacctccaaaggctgactgtccagacttaaccctagagtcacagtatacttcaag 15
Query: 421 ctaccccagtcact 434
||||||||||||||
Sbjct: 14 ctaccccagtcact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
