Query= MSMg01no349_i07.b1 MSMg01no349_i07.b1 CHROMAT_FILE:
MSMg01no349_i07.b1 PHD_FILE: MSMg01no349_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:09 2005
(610 letters)
>mm_chr8_111608569_111609578
Length = 1010
Score = 1127 bits (583), Expect = 0.0
Identities = 601/607 (99%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 5 gaattccaaggcctgttccagttgtttcttacaatatcttgctgtccttgaatgacgatt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaggcctggtccagttgtttcttacaatatcttgctgtccttgaatgacgatt 264
Query: 65 gttaagaggaagtttgttttgtcagatcatgatatagtattcatttagatctatatcacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttaagaggaagtttgttttgtcagatcatgatatagtattcatttagatctatatcacc 324
Query: 125 tctgggaaaaaggcataacaaaaggaggaaatgtcaaaatatgaaccataactttgacgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgggaaaaaggcataacaaaaggaggaaatgtcaaaatatgaaccataactttgacgg 384
Query: 185 tgtgactctttgtagttcttttttcacctgcaatattctcatttttaaaaagttttctca 244
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 385 tgtgactctttgtagttcttttttcacctgcaatattctcatttttaaaacgttttctca 444
Query: 245 taaaaaaatctctttattattagttcatatatttttacaatgtatcataccttggtcata 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 t-aaaaaatctctttattattagttcatatatttttacaatgtatcataccttggtcata 503
Query: 305 ttcacttaaactttattagtccctcccttcctcagtcacccgcttccc-ccccccccccc 363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 504 ttcacttaaactttattagtccctcccttcctcagtcacccgcttcccaccccccccccc 563
Query: 364 atcctagtattgccctttaagagactattttaaaaatagtcttagcttcacagcaaaagc 423
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 atcctagtattgccctttaagagactattttaaaaatagtcttagtttcacagcaaaagc 623
Query: 424 aagcgtagagttcccatgtacccctgctcccgggcatgcgcagttgccttcgttagcgac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagcgtagagttcccatgtacccctgctcccgggcatgcgcagttgccttcgttagcgac 683
Query: 484 atcctgcaccagcgtgatacatttgttacaactgatgaatgtccttgacaccgtgttatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 684 atcctgcaccagcgtgatacatttgttacaactgatgaatgtccttgacacagtgttatc 743
Query: 544 acccaaagtccataatttacattagagctaacttttgaggttttatagcccattggcttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acccaaagtccataatttacattagagctaacttttgaggttttatagcccattggcttt 803
Query: 604 gataaat 610
|||||||
Sbjct: 804 gataaat 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1010
Length adjustment: 10
Effective length of query: 600
Effective length of database: 1000
Effective search space: 600000
Effective search space used: 600000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_i07.g1 MSMg01no349_i07.g1 CHROMAT_FILE:
MSMg01no349_i07.g1 PHD_FILE: MSMg01no349_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:09 2005
(504 letters)
>mm_chr8_111771038_111771941
Length = 904
Score = 971 bits (502), Expect = 0.0
Identities = 502/502 (100%)
Strand = Plus / Minus
Query: 1 aaaggatggggtgagggcaagtgaggagtcacatggaaaacatgcataatattaatatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aaaggatggggtgagggcaagtgaggagtcacatggaaaacatgcataatattaatatgc 643
Query: 61 acaaagaattcttaccgaggacaagcgcctcactacagctcatgggacaaacaggttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 acaaagaattcttaccgaggacaagcgcctcactacagctcatgggacaaacaggttcat 583
Query: 121 taggagacagctctgagcggctacggcattttggtattttgattttttttttccccttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 taggagacagctctgagcggctacggcattttggtattttgattttttttttccccttag 523
Query: 181 tttaaacgaagagtcagacagatgtgccttctttgcatgagagcattgagatggatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tttaaacgaagagtcagacagatgtgccttctttgcatgagagcattgagatggatccaa 463
Query: 241 tctgtgaaatttgctgcccaaatagcatttctaatggaacctgggactaaacaagggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tctgtgaaatttgctgcccaaatagcatttctaatggaacctgggactaaacaagggctt 403
Query: 301 ggatgtggaagggaggggagaagagagaacccacgaagaggaggctactcagccactgcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggatgtggaagggaggggagaagagagaacccacgaagaggaggctactcagccactgcg 343
Query: 361 aggcttttggtagcacaggaagctgtcagaagccatctttgctccactggtcccaggtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aggcttttggtagcacaggaagctgtcagaagccatctttgctccactggtcccaggtgt 283
Query: 421 gggctccagatccagagagccatcagggttcaccaagatgaacactgagcgggcccttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gggctccagatccagagagccatcagggttcaccaagatgaacactgagcgggcccttgt 223
Query: 481 aggtctgaggcagaggaaagcg 502
||||||||||||||||||||||
Sbjct: 222 aggtctgaggcagaggaaagcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
