MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-350I24
Chromosome	8 (Build37)
Map Location	82,886,723 - 82,887,161
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Smad1, LOC666378, LOC666388, LOC666392, Otud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075
Downstream gene	Gypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Link	Open Mouse BAC browser

Click to get alignment info.

name	Smad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17125 MGI:109452
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC666388 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666388
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC666392 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666392
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Otud4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tpd52-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107730 MGI:107737
definition	gene_synonym : Tpd52-rs1 note : tumor protein D52, pseudogene pseudo : _no_value

name	Abce1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anapc10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039439 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Hhip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15245 MGI:1341847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546075 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins pseudo : _no_value

name	Gypa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Frem3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333315 MGI:2685641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins

name	Smarca5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93762 MGI:1935129
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gab1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14388 MGI:108088
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 23 Proteins pseudo : _no_value

name	LOC100039496 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	LOC234501 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:234501
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC100039518 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Usp38 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74841 MGI:1922091
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG70793 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70793 MGI:3646552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC236010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:236010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 58 ESTs, 6 Proteins pseudo : _no_value

name	LOC384852 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384852
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	Smad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476186 GeneID:17125 MGI:109452
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MAD homolog 1 (Drosophila) transcript_id : NM_008539.3

name	Otud4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487190 GeneID:73945 MGI:1098801
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : OTU domain containing 4 transcript_id : NM_001081164.1

name	Abce1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114205430 GeneID:24015 MGI:1195458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family E (OABP), member 1 transcript_id : NM_015751.2

name	Anapc10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130278 GeneID:68999 MGI:1916249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaphase promoting complex subunit 10 transcript_id : NM_026904.2

name	Hhip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328502 GeneID:15245 MGI:1341847
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hedgehog-interacting protein transcript_id : NM_020259.3

name	Gypa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185917 GeneID:14934 MGI:95880
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycophorin A transcript_id : NM_010369.3

name	Frem3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383693 GeneID:333315 MGI:2685641
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 6 Proteins product : Fras1 related extracellular matrix protein 3 transcript_id : XM_984073.1

name	Smarca5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254123 GeneID:93762 MGI:1935129
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 transcript_id : NM_053124.2

name	Gab1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542870 GeneID:14388 MGI:108088
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : growth factor receptor bound protein 2-associated protein 1 transcript_id : NM_021356.2

name	LOC100039496 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258952 GeneID:100039496
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100039496 transcript_id : XM_001472995.1

name	LOC100039518 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258954 GeneID:100039518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039518 transcript_id : XM_001473039.1

name	Usp38 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328300 GeneID:74841 MGI:1922091
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 38 transcript_id : NM_027554.2

name	Smad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543220 CCDS:CCDS22437.1 GeneID:17125 MGI:109452
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA] [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0005057 - receptor signaling protein activity [Evidence ISS]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0030509 - BMP signaling pathway [Evidence IMP] [Evidence ISS] [Evidence TAS]; GO:0007182 - common-partner SMAD protein phosphorylation [Evidence IEA]; GO:0009880 - embryonic pattern specification [Evidence ISS]; GO:0007276 - gametogenesis [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0042592 - homeostasis [Evidence IMP]; GO:0000165 - MAPKKK cascade [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007183 - SMAD protein heteromerization [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence ISS] codon_start : 1 note : Smad 1 product : MAD homolog 1 protein_id : NP_032565.2

name	Otud4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487191 GeneID:73945 MGI:1098801
definition	codon_start : 1 product : HIV-1 induced protein HIN-1 protein_id : NP_001074633.1

name	Abce1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114205431 CCDS:CCDS22438.1 GeneID:24015 MGI:1195458
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) inhibitor; RNS4l (Eye) product : ATP-binding cassette, subfamily E, member 1 protein_id : NP_056566.2

name	Anapc10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:35900980 CCDS:CCDS22439.1 GeneID:68999 MGI:1916249
definition	GO_component : GO:0005680 - anaphase-promoting complex [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0030071 - regulation of mitotic metaphase/anaphase transition [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : anaphase-promoting complex subunit 10 protein_id : NP_081180.1

name	Hhip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328503 CCDS:CCDS22440.1 GeneID:15245 MGI:1341847
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI]; GO:0030324 - lung development [Evidence IMP]; GO:0045879 - negative regulation of smoothened signaling pathway [Evidence IDA]; GO:0007405 - neuroblast proliferation [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0040036 - regulation of fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0007165 - signal transduction [Evidence IDA]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 exception : mismatches in translation note : hedgehog-interacting product : Hedgehog-interacting protein protein_id : NP_064655.3

name	Gypa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185918 GeneID:14934 MGI:95880
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA] GO_process : GO:0007016 - cytoskeletal anchoring [Evidence IMP]; GO:0047484 - regulation of response to osmotic stress [Evidence IMP] codon_start : 1 product : glycophorin A protein_id : NP_034499.3

name	Frem3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94383694 GeneID:333315 MGI:2685641
definition	codon_start : 1 product : similar to FRAS1-related extracellular matrix protein 3 precursor (NV domain-containing protein 2) protein_id : XP_989167.1

name	Smarca5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254124 CCDS:CCDS22442.1 GeneID:93762 MGI:1935129
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0008026 - ATP-dependent helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence TAS] GO_process : GO:0006333 - chromatin assembly or disassembly [Evidence IDA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence IDA] codon_start : 1 product : SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 protein_id : NP_444354.2

name	Gab1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542871 CCDS:CCDS22443.1 GeneID:14388 MGI:108088
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IDA] GO_process : GO:0007257 - activation of JNK activity [Evidence IMP]; GO:0000187 - activation of MAPK activity [Evidence IDA]; GO:0030334 - regulation of cell migration [Evidence IGI]; GO:0006979 - response to oxidative stress [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 product : growth factor receptor bound protein 2-associated protein 1 protein_id : NP_067331.2

name	LOC100039496 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258953 GeneID:100039496
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473045.1

name	LOC100039518 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258955 GeneID:100039518
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473089.1

name	Usp38 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328301 CCDS:CCDS22444.1 GeneID:74841 MGI:1922091
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 38 protein_id : NP_081830.2

name	LOC666378 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666378
definition	number : 1 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 3 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 2 pseudo : _no_value

name	LOC666388 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666388
definition	number : 1 pseudo : _no_value

name	LOC666392 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666392
definition	number : 1 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 2 pseudo : _no_value

name	LOC100039439 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039439
definition	number : 1 pseudo : _no_value

name	LOC234501 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:234501
definition	number : 1 pseudo : _no_value

name	LOC384852 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384852
definition	number : 1 pseudo : _no_value

name	LOC546075 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258956 GeneID:546075
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 97 ESTs, 4 Proteins product : similar to erythropoietin 4 immediate early response pseudo : _no_value transcript_id : XR_031274.1

name	LOC666237 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258957 GeneID:666237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 23 Proteins product : similar to lactate dehydrogenase 1, A chain pseudo : _no_value transcript_id : XR_031340.1

name	EG70793 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149258921 GeneID:70793 MGI:3646552
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG70793 transcript_id : XR_035158.1

name	LOC236010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258958 GeneID:236010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 58 ESTs, 6 Proteins product : similar to Coenzyme Q10 homolog B (S. cerevisiae) pseudo : _no_value transcript_id : XR_031370.1

clone name	MSMg01-473N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545F08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-543K24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-461G22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117N02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492I02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-363M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476P21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-403C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129K01
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-350I24.T7 (MSMg01no350_i24.b1)	MSMg01-350I24.TJ (MSMg01no350_i24.g1)
ACC	AG462145	AG462146
length	784	792
length of high quality (start - end)	442 (50 - 491)	405 (82 - 486)
definition	CHROMAT_FILE: MSMg01no350_i24.b1 PHD_FILE: MSMg01no350_i24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:42:31 2005	CHROMAT_FILE: MSMg01no350_i24.g1 PHD_FILE: MSMg01no350_i24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:42:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NNTTTTTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCC GCGGAATTCCTTTTCCTTTCCATGATACTAAAATATACAGAAAATATTCA TTCTATTTTTACAGGTGGAGGGAGTTTTGTTTTGTTTTTAGCAGTTAAAA AAATGATGCCATGACTAATGTGAGACCATTTGGTCCCCCACAAAGCCAGC GCTTCTATAAACTGAGAAAGTGGACTGTTAGGGAAAACAAAATCTGAACT TGAGTGTTAAGTTTATTTTTCCTTGTGGAAAGTATCTACAATTAAGAGGG TTGGGGAAGATACATAGGATTGGTAATCTGTATACCCCAACTGTGGCAAT GACTGAGGACTGTAAATCTAACATGTGTGCAAAAGAAAGATTGTTGATTA CATTTTGAGCACTTTATTGATTGAAAAGAGCTCAGAACCAATCCACAGAC CCCAAAGCCACTACAGTGATACATACACATATCATTTGTCCATAGGTCAG ACACCATCCTTCTGGGCAACCTTTTTTTTTTTATTCTCAATGCATGGAAA AGAATCCTTCTGGGGCTTGGTGAAAGGGTTTCCCCTCGCAAAATAAGACC TAAGTTTTTTCCCCCAAAACCTGGTACAATAAAAACATGGTGTGGGGGCC CCCACTTTACCCCCTTTTCTGTTTGGGGGTAAAATAAAAATCGAAATATG TTTCCCCCTCTTCCCATTTTTTTTTTTCTCTTCCCATAAACACGGGCCTG CAAAAAAATTAATACCTCTTTTTTTTCTCCCCCC	TTTTTTACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAAATCCATACCC AAGTTTTCAGTTGGGTTATTTGTTTTCTTGATGTCTATTTTTGAACTCTA TATATTTTGAATATTAGCCCTTTATGAAATATATAGTTGGTAAAAGTCTT TTCCCATTCTGTAGGCTGCTACTTTGTGTAATTGTCAGTGTCCTTTATCG TATGAAAAGCCTCTCAGTTTCACGAGGTCACATTTTTTAAAATGACACAC TAATTTTTATTATATTATATACATATACTTGTACATGTACTGTTCATGTC TGTTTTCAGACACACCAGAAAAGGGAATCAAATCCCATTACAGATGATTG TGAGCCACCAGGTGGTTGCTGACACTTGAACTCAGGACCTGTGGAAGAGC AGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCTTGACTCTCTATTC TCTTAGACTTAAAGGATAAACTTCTGAAAATGGGGGGTAAAGCCTTTCCC ACTTCATACCAACTATAATTTCCCCCCCTAACTGGCTTAATGGATTTAAA ATCCACCCCCAAAAGTCTCTCTCTTTTTTTTCCAAAAGGCCTTTTTCTAA TGTTAAGGGGTTGTATTCCCAAGGGAAATTTTTTCCCCGAAACTCTCGGA AATTTTTTGGTTGTGGGAATTTTTTTTTTTCCCCTACTACTGGGGGTGCT TCTTCCTCTCCCCCCCCCCTCTTTGTGAACTTTCCTATCTCG
quality values	Open. Hide. 0 0 3 7 6 6 6 8 8 8 8 8 13 19 26 34 37 37 37 31 32 32 23 18 9 9 9 17 17 25 21 11 10 10 24 19 18 9 9 9 12 9 9 9 9 9 10 11 14 23 25 25 31 30 30 31 31 36 33 50 50 50 46 43 26 20 10 13 10 10 9 9 9 20 23 39 39 37 41 40 37 37 47 48 57 57 53 53 53 53 53 42 47 50 47 47 47 47 47 47 47 51 68 68 68 68 68 68 68 51 51 50 50 50 50 68 68 68 68 68 50 50 48 57 57 48 43 39 35 35 42 44 57 48 48 57 57 68 68 68 68 57 57 57 57 57 57 59 68 68 48 48 41 42 42 42 50 50 50 57 50 50 57 57 57 57 57 50 52 52 57 57 57 57 68 68 68 68 59 59 59 54 54 59 59 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 52 44 44 44 44 57 50 50 52 52 52 43 43 43 43 52 59 59 59 68 68 68 68 57 57 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 43 43 47 57 57 57 59 59 57 57 57 68 68 68 68 68 68 59 59 57 57 44 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 43 47 43 57 48 43 43 59 59 59 59 57 57 57 57 57 57 57 57 59 57 57 57 57 43 43 43 43 28 28 24 18 13 12 8 8 8 10 13 17 34 47 59 59 48 48 48 59 57 57 43 43 43 48 48 57 48 40 40 47 43 43 44 43 57 48 59 59 59 59 59 59 59 57 46 47 39 39 32 32 30 37 37 46 46 54 57 59 68 68 59 43 42 36 37 37 37 37 48 48 50 54 54 54 54 54 54 59 59 68 68 59 59 48 48 59 59 57 50 50 50 50 50 43 43 40 43 40 39 39 30 32 32 35 39 30 34 23 22 20 25 21 29 32 37 32 37 30 37 37 39 39 38 34 31 39 32 32 28 31 35 31 31 35 37 37 33 28 30 22 20 23 32 25 32 20 20 15 25 15 15 15 23 30 36 36 35 35 28 27 21 11 10 10 10 10 15 9 9 9 9 12 9 11 9 9 9 11 10 10 10 12 15 15 14 9 9 9 8 10 13 15 14 24 22 25 25 22 22 21 21 24 21 19 11 10 7 6 6 8 6 6 7 10 10 11 11 11 15 19 17 24 11 11 11 13 15 13 12 8 8 6 6 8 9 11 9 20 11 8 8 12 8 8 8 9 8 10 10 11 11 11 12 13 10 8 8 8 8 8 10 8 8 8 8 8 7 6 8 8 9 9 10 11 10 10 9 9 9 11 12 22 20 20 20 15 12 10 9 10 7 9 9 7 7 8 10 10 9 9 8 8 10 10 13 16 23 8 8 8 8 8 8 11 12 11 11 11 16 16 14 14 12 12 9 9 9 9 9 10 14 13 11 11 14 20 18 15 14 12 12 9 8 8 6 6 6 6 8 10 8 8 9 9 9 14 15 6 7 6 15 11 7 7 6 8 8 8 8 8 8 9 9 9 10 11 11 11 11 9 9 8 8 8 8 15 12 14 12 12 12 16 19 22 23 23 22 19 19 15 14 13 10 8 11 11 11 10 10 13 10 6 8 6 6 6 6 8 8 9 9 10 8 8 8 8 9 15 22 9 7 7 6 8 8 8 12 12 12 10 7 6 8 8 14 10 10 8 7 7 10 10 10 8 11 11 12 12	Open. Hide. 7 7 7 7 15 6 6 6 6 8 10 10 9 9 8 7 7 9 9 17 13 25 22 26 25 37 27 28 30 28 32 32 31 37 31 32 40 28 18 12 9 11 10 10 8 8 10 10 22 22 37 31 31 32 37 37 37 37 41 41 59 50 53 53 53 43 26 21 20 15 21 21 21 27 22 18 32 28 33 36 42 57 57 57 54 57 57 68 68 68 68 53 53 50 50 54 54 50 50 50 50 50 51 68 68 51 50 50 50 50 50 57 68 68 68 68 68 68 57 57 57 54 54 57 57 68 57 57 50 50 47 47 47 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 68 50 50 50 68 68 57 57 57 59 59 59 59 68 68 68 68 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 59 59 68 68 68 68 59 59 59 59 62 62 62 68 68 62 62 62 52 52 62 62 52 52 52 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 59 59 57 57 48 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 57 57 59 68 68 59 59 59 59 59 57 57 57 57 54 54 59 59 57 59 59 57 57 57 57 57 57 59 59 57 43 47 42 39 39 39 47 57 57 57 48 48 48 37 47 35 36 39 43 43 44 37 37 39 43 37 39 39 36 36 39 43 41 41 37 36 40 34 28 25 24 32 37 28 32 36 30 30 24 28 37 24 24 17 14 13 25 28 37 28 28 28 31 28 28 18 21 18 18 17 16 27 25 32 26 28 24 10 10 9 12 9 10 19 24 34 31 26 20 25 24 21 13 19 10 10 10 15 15 10 10 14 14 11 11 15 14 14 10 12 9 8 8 10 8 8 8 9 9 8 8 9 9 9 11 13 13 17 15 17 17 21 11 8 8 8 10 11 17 19 13 10 11 12 8 8 8 8 8 8 8 14 19 14 8 8 8 8 8 8 10 8 8 8 8 8 8 9 9 9 12 10 10 11 9 10 14 11 9 8 8 8 9 10 10 10 9 9 9 10 10 10 11 9 9 10 10 8 8 8 8 10 10 13 22 13 10 8 8 6 7 8 10 12 14 14 14 15 15 11 13 9 9 9 6 6 6 6 6 6 9 9 17 17 24 18 15 11 15 19 12 15 14 14 10 10 13 10 9 10 8 8 8 9 8 8 8 8 8 8 10 6 6 6 8 16 13 13 10 10 10 10 10 10 11 10 10 10 15 11 11 10 10 10 10 9 9 9 8 8 8 8 8 10 15 10 10 11 8 6 6 10 6 6 8 8 9 10 10 10 11 10 8 8 8 8 8 9 10 8 10 11 14 10 11 10 10 9 11 15 14 16 15 8 8 8 8 8 6 8 6 6 8 8 8 8 8 10 11 8 8 6 6 6 8 9 9 12 13 10 10 10 13 10 11 11 12 12 12 21 22 16 14 8 8 8 6 6 10 8 6 6 6 6 8 9 9 9 9 8 8 8 8 9 10 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no350_i24.b1 MSMg01no350_i24.b1 CHROMAT_FILE:
MSMg01no350_i24.b1 PHD_FILE: MSMg01no350_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:31 2005
         (442 letters)



>mm_chr8_82886519_82887361
          Length = 843

 Score =  791 bits (409), Expect = 0.0
 Identities = 432/443 (97%), Gaps = 9/443 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttttcctttc----catgatactaaaatatacagaaaatattcattctatttt 60
           ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttttcct---aagacatgatactaaaatatacagaaaatattcattctatttt 261

                                                                       
Query: 61  tacaggtggagggagttttgttttgtttttagcagttaaaaaaatgatgccatgactaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tacaggtggagggagttttgttttgtttttagcagttaaaaaaatgatgccatgactaat 321

                                                                       
Query: 121 gtgagaccatttggtcccccacaaagccagcgcttctataaactgagaaagtggactgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgagaccatttggtcccccacaaagccagcgcttctataaactgagaaagtggactgtt 381

                                                                       
Query: 181 agggaaaacaaaatctgaacttgagtgttaagtttatttttccttgtggaaagtatctac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agggaaaacaaaatctgaacttgagtgttaagtttatttttccttgtggaaagtatctac 441

                                                                       
Query: 241 aattaagagggttggggaagatacataggattggtaatctgtat-accccaactgtggca 299
           ||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||
Sbjct: 442 aattaagagggttggggaagatacataggattggtaatctg-aggaccccaactgtggca 500

                                                                       
Query: 300 atgactgaggactgtaaatctaacatgtgtgcaaaagaaagattgttgattacattttga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgactgaggactgtaaatctaacatgtgtgcaaaagaaagattgttgattacattttga 560

                                                                       
Query: 360 gcactttattgattgaaaagagctcagaaccaatccacagaccccaaagccactacagtg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcactttattgattgaaaagagctcagaaccaatccacagaccccaaagccactacagtg 620

                                  
Query: 420 atacatacacatatcatttgtcc 442
           ||||||||||||| |||||||||
Sbjct: 621 atacatacacataccatttgtcc 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space:   361122
Effective search space used:   361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information