NNNNNAAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTTTATAAAGTTGTGTTTTTCTAGACTCTATTTTTAA
TCCCACCTATTGAAAAAAAAAGATCATTTGCGGAAACTGTAAAATGAGGT
AGAGTCAGAGAGAGAATGAAAACCCACACTGAATGGTTTCAGGCACTGGT
TCCCACCTTTACCTCTTGCTGCTGTACTTGGAGAATGTCACATATGTGCC
ACTGGGCACATGAGAACATCTCCCAACCATAGCTCACTGTGCTTGCAGAA
ATCCTAACGGGGGAGTAGAGGCTGCCCCTGACTTGTTTGCCTGCCTGCTC
ATAGTATCCTTTTCCTCCCACTAGATTGCCTCGTCCAGCCGTGCTGTGCT
GGTATGTGCTGACTCTTACTGTGATATGCTATGTCATGCTTGGTTGATGT
TCCTGGGAGGCCTGATCTTTTCTAAGGAAAAACCTGGGCATGGGGGAGGA
GGCAGGGGGGAATCTGAGGNAGAGGGGAGGCAGNGGAGCAAAAGGAGGNT
AGGGNGNNGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNGNNNNNNNNNNNNNGNNNNNNNGNNNNGNNNNNGNNGTTGNNNGNNG
GGNNAANNGNNNNAANNNGNNNATTTTTAGAANATANAANAANANNAAAA
AANAAAAAATAAGAGTTTTATTTTTTTAATTTTTTATTNTATATNNA

NNNNNNNNCCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGATCTGT
ACTTCATTTTTTTTTTTTAAAAAATAGGGTTATTTGGTTTGCTGGAGTCT
AATTTCTTGAGTTCTTTGTATATATTGGATATTAGCCCTCTATTGGATGT
AGGATTGGTAAAGATCTTTTCCCAATCTATTGATTGCCATTTTGTCCTAT
TAACAGTGTCCTTTGCCTTACAGAAGCTTTGTAATTTTATGAGGTCCCAT
TTGCCAATTCTTGATCTTAGAGCATAAGCTATTGGTGTTCTATTCAGGAA
AATTTCCCCTGTGCTCATGTCCTCGAGGTTCTTCCCCACTTTCTTTTCTA
TTATTTTCAGTGTATATAGTTTTATGAGGAGGTTCTTGATCCACATGTAC
TTGAGCTTTGTACAAGTAGATAAGAATGTATCAATTTGCATTCTTCTGCA
TGCTAACTGTCAGTTGAACTAGCACCGTTTGTTGAAAATGCTGTCTTTTT
TTCCCACTGGATGGTTTTAGCTCTTTTGGCGAAAATCAGTGACCATAAGT
GGATGGGTTCATTTCTGGGGCTTTCATTCTATTCCATAAAACTACCTGCC
TGGCCCTGGACCATAATATGGATTTTTTTTAAAACACTTTTGTTTTGTAA
AAAATTTGGGTGCCGGTAGGGGGATCCCAACACAAATTCTTTT

Query= MSMg01no351_b15.b1 MSMg01no351_b15.b1 CHROMAT_FILE:
MSMg01no351_b15.b1 PHD_FILE: MSMg01no351_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:16 2005
         (466 letters)



>mm_chr8_25897274_25898142
          Length = 869

 Score =  859 bits (444), Expect = 0.0
 Identities = 458/464 (98%), Gaps = 3/464 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttataaagttgtgtttttctagactctatttttaatcccacctattgaaaaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttataaagttgtgtttttctagactctatttttaatcccacctattgaaaaaa 264

                                                                       
Query: 65  aaa---gatcatttgcggaaactgtaaaatgaggtagagtcagagagagaatgaaaaccc 121
           |||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaaagatcatttgcggaaactgtaaaatgaggtagagtcagagagagaatgaaaaccc 324

                                                                       
Query: 122 acactgaatggtttcaggcactggttcccacctttacctcttgctgctgtacttggagaa 181
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acactaaatggtttcaggcactggttcccacctttacctcttgctgctgtacttggagaa 384

                                                                       
Query: 182 tgtcacatatgtgccactgggcacatgagaacatctcccaaccatagctcactgtgcttg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtcacatatgtgccactgggcacatgagaacatctcccaaccatagctcactgtgcttg 444

                                                                       
Query: 242 cagaaatcctaacgggggagtagaggctgcccctgacttgtttgcctgcctgctcatagt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagaaatcctaacgggggagtagaggctgcccctgacttgtttgcctgcctgctcatagt 504

                                                                       
Query: 302 atccttttcctcccactagattgcctcgtccagccgtgctgtgctggtatgtgctgactc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atccttttcctcccactagattgcctcgtccagccgtgctgtgctggtatgtgctgactc 564

                                                                       
Query: 362 ttactgtgatatgctatgtcatgcttggttgatgttcctgggaggcctgatcttttctaa 421
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttactgtgatatgctatgtcatgtttggttgatgttcctgggaggcctgatcttttctaa 624

                                                       
Query: 422 ggaaaaacctgggcatgggggaggaggcaggggggaatctgagg 465
           ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggaaagacctgggcatgggggaggaggcaggggggaatctgagg 668


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 869
Length adjustment: 10
Effective length of query: 456
Effective length of database: 859
Effective search space:   391704
Effective search space used:   391704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)