NNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTGATTCGGCTGCCAGTCATGCTCCAGGAGCCTCCTT
TATCTACCAGCACTGAGATCACGGTGTTTACCATGCCAGGCTTTTTATTT
GGATGCTGGTATCCAAGTCCATGTTTTTGGCTTAGGCAGCAAGCCCTTTA
CCCTCTGAAAAATCTCCCAATACCTCACTTACTATTTGAACTTTTTTTTT
TTTGTTTTTTGTTTTCTTCCTTTTATGAACAAAGAAAACATATACTACCA
TGATGTCTGAAAGTTTAGATTCAATTCCATAAACTATGTAAGGTGTTTAC
AAGTATACTCATATTTCTTCAATAATAGTTCAGTATGTGCTGAATATATG
GTGAGCCAACTTTCTTAGACATACCTACCATAAGGGATACTGCTGCTGCT
GCTGCTGGTGGTGGCAATGATGATGATGGTGATGCTGATGATTGTGATAA
TGGTGATGATAAACCACAGCTGCATTTTTTTAAACACAAAAGATAAAGAC
TTTTGCTCCTTGACTGTTATGTAGTAGGAAAAGAGAAGGCAGAATTTGTA
AAATGCTCAAATGAGTCTCTGTTCAGTATAAAACCCTGTGTAAAAGTTTG
CTAGTATTAGCATCATTATTAGAAATATAGAAATAACCANGGCAGTGGTG
ACGCACCGCCTTTAATCCCAGACTTGGGAAGCAGAAGCAA

NNNNNTTACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCCCTGAGTTTGATT
ATTTCCTGCCATCTACTCATCTTGGGTGAATTTGCTTCCTTTTCTTCTAG
ACCTTTTAGGTGTGTTGTCAAGCTGCTAATGTGTGCTCTCTCTAGTTTCT
TTTTGGAGGCACTCAGAGCTATGAGTTTTCCTCTTAGGAATGCTTTCATT
GTGTCCCATAAGTTTGGGTATGTTGTGGCTTCATTTTCATTAAACTCCAA
AAAGTCCTTAATTTCTTTCTTTATTCCTTCCTTGATCAAGTTATCATTCA
GTAGAGTGTTGTTCAGTTTCCACATGTATGAGGGTTTTCTATTATTTATG
TTGTTATTGAAGATCAGCCTTAATCCATGGTGATCTGATAGGGTGCATAG
GATAATTTCACTAATTTTGTATCTGTTGAGGTCTGTTTTGTGACCAATTC
TACAGTCAGTTTTGGAGAAGATACCATGAGGTGCTGAGAAGAAGGTATAT
CCTATTGTTTTAGGATAAAATGTTCTGAGGATATCTGTTAAATCAATTTG
TTTCATAATTTCTATTAGATTTACTGTGGNCTCTGTTTAGTTTCTTTTTT
CCAGAACCGGCCATTGATGAGAGTGGGATATCCAAATCTTCCCCCTATTA
TTTGTGTGGAGGGCTATGTGCTTTGAACCTTTACTAAAAATTCCTTAAGG
ATGGGGGTGGCCCG

Query= MSMg01no351_b19.b1 MSMg01no351_b19.b1 CHROMAT_FILE:
MSMg01no351_b19.b1 PHD_FILE: MSMg01no351_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:17 2005
         (565 letters)



>mm_chr8_55451424_55452387
          Length = 964

 Score = 1023 bits (529), Expect = 0.0
 Identities = 557/571 (97%), Gaps = 10/571 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactgattcggctgccagtcatgctccaggagcctcctttatctaccagcactg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ggaattcactgattcggctgccagtcatgctccaggagcctcctttatctaccagcactg 708

                                                                       
Query: 64  agatcacggtgtttaccatgccaggctttttatttggatgctggtatccaagtccatgtt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 707 agatcacggtgtttaccatgccaggctttttatttggatgctggtatccaagtccatgtc 648

                                                                       
Query: 124 tttggcttaggcagcaagccctttaccctctgaaaaatctcccaatacctcacttactat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tttggcttaggcagcaagccctttaccctctgaaaaatctcccaatacctcacttactat 588

                                                                       
Query: 184 ttgaacttttttttttttgttttttgttttcttccttttatgaacaaagaaaacatatac 243
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttgaacttttttttttgt-ttttttgttttcttccttttatgaacaaagaaaacatatac 529

                                                                       
Query: 244 taccatgatgtctgaaagtttagattcaattccataaactatgtaaggtgtttacaagta 303
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 taccatggtgtctgaaagtttagattcaattccataaactatgtaaggtgtttacaagta 469

                                                                       
Query: 304 tactcatatttcttcaataatagttcagtatgtgctgaatatatggtgagccaactttct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tactcatatttcttcaataatagttcagtatgtgctgaatatatggtgagccaactttct 409

                                                                       
Query: 364 tagacatacctaccataagggatactgctgctgctgctgctg--g-------tggtggca 414
           ||||||||||||||||||||||||||||||||||||||||||  |       ||||||||
Sbjct: 408 tagacatacctaccataagggatactgctgctgctgctgctgctgctgctgctggtggca 349

                                                                       
Query: 415 atgatgatgatggtgatgctgatgattgtgataatggtgatgataaaccacagctgcatt 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 348 atgatgatgatggtgatgctgatgattgtgataatggtgatgataaaccacagctgtatt 289

                                                                       
Query: 475 tttttaaacacaaaagataaagacttttgctccttgactgttatgtagtaggaaaagaga 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttttaaacacaaaagataaagacttttgctccttgactgttatgtagtaggaaaagaga 229

                                          
Query: 535 aggcagaatttgtaaaatgctcaaatgagtc 565
           |||||||||||||||||||||||||||||||
Sbjct: 228 aggcagaatttgtaaaatgctcaaatgagtc 198


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 964
Length adjustment: 10
Effective length of query: 555
Effective length of database: 954
Effective search space:   529470
Effective search space used:   529470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)