Query= MSMg01no353_i19.b1 MSMg01no353_i19.b1 CHROMAT_FILE:
MSMg01no353_i19.b1 PHD_FILE: MSMg01no353_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:27 2005
(517 letters)
>mm_chr8_64374784_64375701
Length = 918
Score = 949 bits (491), Expect = 0.0
Identities = 509/515 (98%), Gaps = 1/515 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgttgtctgcacagaaactgttaaaagtggttattaatagtaccattaagaac 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttgtctgcaaagaaactgttaaaagtggttattaatagtaccattaagaac 263
Query: 64 ataatggaacatactttcaggctacatatgttaagtatacataaagcataaatggttttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataatggaacatactttcaggctacatatgttaagtatacataaagcataaatggttttg 323
Query: 124 catatagatttgagcacccatctcttaagtgcctcattatgtgtacacaaatatcttaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 catatagatttgagcacccatctcttaagtgcctcattatgtgtacacaaatatctcaaa 383
Query: 184 tgttgaaaaaatgtagtttctgagacatctttgattctaaccatttcctataaaagctat 243
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 tgttgaaaaaatgtagtttctgagacatctttgattctaaacatttcctataaaagctat 443
Query: 244 tcaacctgtattagacagaaagaattgtgtaaagtctgctaactctttgaaacatatgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaacctgtattagacagaaagaattgtgtaaagtctgctaactctttgaaacatatgta 503
Query: 304 acatggatacagttaaaaaggcacctactattagttatgcttctctttgatagcctaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acatggatacagttaaaaaggcacctactattagttatgcttctctttgatagcctaagg 563
Query: 364 acatagtcatctgaaggagtcacatcccaacatcccttagactttttgttcattgcttgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acatagtcatctgaaggagtcacatcccaacatcccttagactttttgttcattgcttgt 623
Query: 424 gctgagagtcagggctcggaactcaggcattctaagtgcccaaccactgagcttcacatc 483
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctgagaatcagggctcagaactcaggcattctaagtgcccaaccactgagcttcacatc 683
Query: 484 ca-aatctaacattttatagaagaggtatgattag 517
|| ||||||||||||||||||||||||||||||||
Sbjct: 684 cacaatctaacattttatagaagaggtatgattag 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_i19.g1 MSMg01no353_i19.g1 CHROMAT_FILE:
MSMg01no353_i19.g1 PHD_FILE: MSMg01no353_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:27 2005
(180 letters)
>mm_chr8_64551982_64552566
Length = 585
Score = 296 bits (153), Expect = 5e-85
Identities = 175/185 (94%), Gaps = 5/185 (2%)
Strand = Plus / Minus
Query: 1 aagtggaatcagtgatctgagtttaaagaataaaagtacaaaaccccacgggttcagagg 60
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 385 aagtggaatcagtgatctgagtttaaagaataaaagtacaaaaccctacaggttcagagg 326
Query: 61 acattttaaaggtcatgga-----ctttatttttataaagtgtgtgttacagtgtgtacg 115
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 acattttaaaggccatggacttttctttatttttataaagtgtgtgttacagtgtgtaca 266
Query: 116 ttttaataagtatgctatgatatgtgagttctggagaggggtgtgtatgtgtgtgttatg 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 ttttaataagtatgctatgatatgtgagttctggagaggggtgtgtatgtgtgtgtaatg 206
Query: 176 gggtg 180
|||||
Sbjct: 205 gggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 585
Length adjustment: 8
Effective length of query: 172
Effective length of database: 577
Effective search space: 99244
Effective search space used: 99244
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
