Query= MSMg01no353_p02.b1 MSMg01no353_p02.b1 CHROMAT_FILE:
MSMg01no353_p02.b1 PHD_FILE: MSMg01no353_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:57 2005
(429 letters)
>mm_chr8_100534518_100535347
Length = 830
Score = 721 bits (373), Expect = 0.0
Identities = 413/427 (96%), Gaps = 5/427 (1%)
Strand = Plus / Minus
Query: 5 gaattcattatttcttctttgacacttgcaaacttttattttcttacattatatctttc- 63
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 gaattcattatttcttctttgacacgtgcaaacttttattttcttacattatatctttct 386
Query: 64 ttttttgtaattttatgttttcaattcattaaacataatttgtatttaattggtataggc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 385 ttttttgtaattttatgttttcaattcattaaacataatttgtatttaattggtatatgc 326
Query: 124 tctatctgattatgatgctattttcatacatatttaattttcctgatttcctctcctgct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctatctgattatgatgctattttcatacatatttaattttcctgatttcctctcctgct 266
Query: 184 tatctctcccatcttgcttcaatctcctgtgtagcagggaaaagttaatcagctcagagc 243
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 tatctctcccatcttgcttcaatctcctgtgcagcagggaaaagttaatcagctcagagc 206
Query: 244 tccacccgccagagtcctctggattcttaaatgaaaacacacacacacacacacacacac 303
||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 205 tccacccaccagagtcctctggattcttgaatgaaa--acacacacacacacacacacac 148
Query: 304 acacacacacacacactttatattttgatttgcctggcacttccaaatctctccaaggct 363
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 147 acacacacacacacactttatattttgacttgcctagcacttccaaatctctccaaggct 88
Query: 364 agcaatcctccccatacagtattcttgaattaatccatatttt-aagttgctaccacaga 422
||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 87 agcaatcctcccc-tacattattcttgaattaatccatattttaaagttgctaccacaga 29
Query: 423 cttaatc 429
|| ||||
Sbjct: 28 ctgaatc 22
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_p02.g1 MSMg01no353_p02.g1 CHROMAT_FILE:
MSMg01no353_p02.g1 PHD_FILE: MSMg01no353_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:57 2005
(375 letters)
>mm_chr8_100378531_100379305
Length = 775
Score = 601 bits (311), Expect = e-176
Identities = 332/341 (97%), Gaps = 4/341 (1%)
Strand = Plus / Plus
Query: 1 ttttcttcctgctggtagggagaaacccccataccatttgagaaattttcatgatgtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcttcctgctggtagggagaaacccccataccatttgagaaattttcatgatgtatg 260
Query: 61 cagtttgtttcactagctactaaatcaaattcctccacttatgaactgtctgtaagagaa 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttgtttcactaactactaaatcaaattcctccacttatgaactgtctgtaagagaa 320
Query: 121 tctccattttaggctttgaaggagtgtctaaaataaggagtctcacaaagaaaaaaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctccattttaggctttgaaggagtgtctaaaataaggagtctcacaaagaaaaaaatct 380
Query: 181 gaggtaatttttctgaatcagagaatgtacctgagaggagcagaaagtgtgggtgccttg 240
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 gagttaatttttctgaatcagagaatgtacctgagaggagcagaaagtgagggtgccttg 440
Query: 241 aatgaaattgcacattttacattaattctctttaagggagattcttaattttgggggcag 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgaaattgcacattttacgttaattctctttaagggagattcttaattttgggggcag 500
Query: 301 ggagaaacacacacacacacacacagagacacagacacaca 341
||||||||||||||||||||||||| |||| |||||||
Sbjct: 501 ggagaaacacacacacacacacaca----cacacacacaca 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
