Query= MSMg01no357_k05.b1 MSMg01no357_k05.b1 CHROMAT_FILE:
MSMg01no357_k05.b1 PHD_FILE: MSMg01no357_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:41 2005
(430 letters)
>mm_chr8_36238871_36239701
Length = 831
Score = 826 bits (427), Expect = 0.0
Identities = 430/431 (99%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 1 tgctgatcagaagatgaaaaa-atctggaagtaaattggaaggacagtttctatcagcac 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgctgatcagaagatgaaaaacatctggaagtaaattggaaggacagtttctatcagcac 572
Query: 60 ataaccaggaatttaagtatctcataactggtcaggtacaaagccagtctaattcctatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ataaccaggaatttaagtatctcataactggtcaggtacaaagccagtctaattcctatt 512
Query: 120 ttagagagcaggttgctcagtgccagacctagacaggtacatgtttggcattgtacttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttagagagcaggttgctcagtgccagacctagacaggtacatgtttggcattgtacttta 452
Query: 180 ttaaagataaataaaagtctttggtcagtccttctgatgtagaggattcagtctacaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ttaaagataaataaaagtctttggtcagtccttctgatgtagaggattcagtctacaaac 392
Query: 240 tgtttccatggcaacttattaggacttggttttagacatttttatagtgggcctacactc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgtttccatggcaacttattaggacttggttttagacatttttatagtgggcctacactc 332
Query: 300 agttgtattagagtggttacttaaatgaagtgaaacatccagccacagtttccatagttg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 agttgtattagagtggttacttaaatgaagtgaaacatccagccacagtttccatagttg 272
Query: 360 cagttcaagtgtcccgtggccacatacgtctatatatcacacagaccaaactgaaactgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cagttcaagtgtcccgtggccacatacgtctatatatcacacagaccaaactgaaactgt 212
Query: 420 ccagctgtaag 430
|||||||||||
Sbjct: 211 ccagctgtaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_k05.g1 MSMg01no357_k05.g1 CHROMAT_FILE:
MSMg01no357_k05.g1 PHD_FILE: MSMg01no357_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:41 2005
(530 letters)
>mm_chr8_36058993_36059922
Length = 930
Score = 1025 bits (530), Expect = 0.0
Identities = 530/530 (100%)
Strand = Plus / Plus
Query: 1 cacgagtcacactgactctggggacaccaagcaccagctatgacaagagtccatctaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgagtcacactgactctggggacaccaagcaccagctatgacaagagtccatctaagg 260
Query: 61 tctttgtcccactgaaacatgtcaaaaggcacaacaaaaataaaccacatgctgaacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttgtcccactgaaacatgtcaaaaggcacaacaaaaataaaccacatgctgaacacc 320
Query: 121 gtgagaagagctcaaaagcaaccagcggaaagggaaggctagacaaatgagggcttacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgagaagagctcaaaagcaaccagcggaaagggaaggctagacaaatgagggcttacat 380
Query: 181 aaattccaagtactaatgatcaagcaaattttatttccacagattttcacaaaaaacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattccaagtactaatgatcaagcaaattttatttccacagattttcacaaaaaacaag 440
Query: 241 tttaattatgtacattcagcaagaatggtcatgagatatctcaatagacatagaagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaattatgtacattcagcaagaatggtcatgagatatctcaatagacatagaagcttt 500
Query: 301 ttactgttaaagataagtacaagggaactatgattgggaactattgaatagaatttatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttactgttaaagataagtacaagggaactatgattgggaactattgaatagaatttatag 560
Query: 361 ctcgataggttttgaaatcggtttatttgaattataaggaaatacttcatgtataatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcgataggttttgaaatcggtttatttgaattataaggaaatacttcatgtataatgtt 620
Query: 421 ctttgagttttgcttaataggcatactaattaacttctcaaactcaataaaaatgtagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctttgagttttgcttaataggcatactaattaacttctcaaactcaataaaaatgtagga 680
Query: 481 aatttacctatgttcagcacttgacaaataaatcatgttaattacatatt 530
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatttacctatgttcagcacttgacaaataaatcatgttaattacatatt 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
