Query= MSMg01no358_h14.b1 MSMg01no358_h14.b1 CHROMAT_FILE:
MSMg01no358_h14.b1 PHD_FILE: MSMg01no358_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:45 2005
(475 letters)
>mm_chr8_63532693_63533566
Length = 874
Score = 890 bits (460), Expect = 0.0
Identities = 469/472 (99%), Gaps = 1/472 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttccacttggttggctctctctacagctaagtgtcctttttgcctaatttgga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggaattcttccacttggttggctctctctacagctaagtgtcctttttgcctaatttgga 615
Query: 64 caaatcacagagtcagcaattttcagcattaaattccacattaaacctgtaattattata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 caaatcacagagtcagcaattttcagcattaaattccacattaaacctgtaattattata 555
Query: 124 tgaaagcagaaataaaatatacattctctgtgaagaagtgtctgtgtgtgtgtgtgttct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgaaagcagaaataaaatatacattctctgtgaagaagtgtctgtgtgtgtgtgtgttct 495
Query: 184 taacagcacttcaactcttgacaagattcattttataatgatatgattcattttacttac 243
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 494 taacagcacttcaactcttgacaagattcattttacaatgatatgattcatcttacttac 435
Query: 244 agacagtaaaatggacaaggtagggggaaagtaccagcagtcattgccttcagtcttttc 303
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 434 agacagtaaaatggacaaggta-ggggaaagtaccagcagtcattgccttcagtcttttc 376
Query: 304 tcacctcatttcagcatctttcgttgactactacgaaagaatgtaaatatgctgagtata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcacctcatttcagcatctttcgttgactactacgaaagaatgtaaatatgctgagtata 316
Query: 364 tagacagcaaatgaagaggtgataaacactcactgaacatctgccccatgctgtgtcagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tagacagcaaatgaagaggtgataaacactcactgaacatctgccccatgctgtgtcagt 256
Query: 424 cagcgtgagaaacacgggagatagacacaaatgtgcacagatgtaacccagc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cagcgtgagaaacacgggagatagacacaaatgtgcacagatgtaacccagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 874
Length adjustment: 10
Effective length of query: 465
Effective length of database: 864
Effective search space: 401760
Effective search space used: 401760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_h14.g1 MSMg01no358_h14.g1 CHROMAT_FILE:
MSMg01no358_h14.g1 PHD_FILE: MSMg01no358_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:45 2005
(492 letters)
>mm_chr8_63370078_63370969
Length = 892
Score = 919 bits (475), Expect = 0.0
Identities = 489/495 (98%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 1 agtccctgaagtcatgtggagttagggaaggggacaatgtgaccaaatacgttgtatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtccctgaagtcatgtggagttagggaaggggacaatgtgaccaaatacgttgtatgta 260
Query: 61 aaaccactcccacagttctgcatctacccatttgggtgccttttcctttttgcctaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaccactcccacagttctgcatctacccatttgggtgccttttcctttttgcctaagca 320
Query: 121 tttcctgccgcttctagtcactgtggctatcaccctgaagttggagttacccttgccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcctgccgcttctagtcactgtggctatcaccctgaagttggagttacccttgccttc 380
Query: 181 ttgtagagtttgttgtttccttaaaaagcttttatggtacatcttgtcttagtcagtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtagagtttgttgtttccttaaaaagcttttatggtacatcttgtcttagtcagtatt 440
Query: 241 ctactgctgtgaagagacaccatgaccattaaaaaaaaaaa---gtgcctagctggggct 297
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 ctactgctgtgaagagacaccatgaccattaaaaaaaaaaaaaagtgcctagctggggct 500
Query: 298 tgattacagttttagaggttcggtccactatcaccacggctggaagcatggtagcaggca 357
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 tgattacagttttagaggttcggtccactatcaccacggctggaagcgtggtagcaggca 560
Query: 358 ggcaggtatgctgcaggagaagcagagagttctacatctagactggaaggcagcaggaag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcaggtatgctgcaggagaagcagagagttctacatctagactggaaggcagcaggaag 620
Query: 418 ggagagactctgggcgtggaatgggctttttgaaacctcaaagtcttatctatcccctaa 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggagagactctgggcgtggaatgggctttttgaaacctcaaagtcttatctatcccctag 680
Query: 478 tgacatacttcctcc 492
||||| |||||||||
Sbjct: 681 tgacacacttcctcc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
