Query= MSMg01no359_c15.b1 MSMg01no359_c15.b1 CHROMAT_FILE:
MSMg01no359_c15.b1 PHD_FILE: MSMg01no359_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:36 2005
(510 letters)
>mm_chr8_34814545_34815455
Length = 911
Score = 965 bits (499), Expect = 0.0
Identities = 505/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 5 gaattctctttaacaaa-tatgtgtgtgtgtggcagggagggaatgtagaatttaggcag 63
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttaagaaaatatgtgtgtgtgtggcagggagggaatgtagaatttaggcag 264
Query: 64 tgggacagggactttcctaaagaggaagtggtcctgcagttgttattccttttttaaaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgggacagggactttcctaaagaggaagtggtcctgcagttgttattccttttttaaaga 324
Query: 124 tttatttatttattatatgtaagtacactgtagctgtcttcagacaccccagtagaggac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttatttatttattatatgtaagtacactgtagctgtcttcagacaccccagtagaggac 384
Query: 184 ttcgaatctcattacagatggttgtgagccaccgtgtggctgctgggatttgaactcggg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcgaatctcattacagatggttgtgagccaccgtgtggctgctgggatttgaactcggg 444
Query: 244 gccttggaagagcagtcagtgctcttaactactgagccatctctccagcccattcctgct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccttggaagagcagtcagtgctcttaactactgagccatctctccagcccattcctgct 504
Query: 304 gttattcaagggtttccaggtttgtaaactaggtcaacctgagaactggaggagactcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttattcaagggtttccaggtttgtaaactaggtcaacctgagaactggaggagactcta 564
Query: 364 catccctgttttggtgattcgatctagagtcttccacttacacagagaatatgatattta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catccctgttttggtgattcgatctagagtcttccacttacacagagaatatgatattta 624
Query: 424 taggccaaagtctattccactcataggaacaccttgaccaaccagccatcgccacaggac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taggccaaagtctattccactcataggaacaccttgaccaaccagccatcgccacaggac 684
Query: 484 taggtaccctcattaactactttcctt 510
|||||||||||||||||||||||||||
Sbjct: 685 taggtaccctcattaactactttcctt 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_c15.g1 MSMg01no359_c15.g1 CHROMAT_FILE:
MSMg01no359_c15.g1 PHD_FILE: MSMg01no359_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:36 2005
(416 letters)
>mm_chr8_34985072_34985887
Length = 816
Score = 804 bits (416), Expect = 0.0
Identities = 416/416 (100%)
Strand = Plus / Minus
Query: 1 ctgctcttctctttccaccagtcgagctctaggactgcattgggcctctctgtccagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctgctcttctctttccaccagtcgagctctaggactgcattgggcctctctgtccagctg 557
Query: 61 tggcttgtcatctcttatcccccagtagtgaacccagccttccacttccttataactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggcttgtcatctcttatcccccagtagtgaacccagccttccacttccttataactaaa 497
Query: 121 tagttcatgtgctgtctgagtccttccgtttctcatcactgataaatacccacaaaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tagttcatgtgctgtctgagtccttccgtttctcatcactgataaatacccacaaaacag 437
Query: 181 tttctggaatgaaagactttccttagctcatggtcttagaggttttggtccatatttgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttctggaatgaaagactttccttagctcatggtcttagaggttttggtccatatttgag 377
Query: 241 gccactgtattgcttctgggccccaactaaggcagaacgtgatgacagagagcccttgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gccactgtattgcttctgggccccaactaaggcagaacgtgatgacagagagcccttgat 317
Query: 301 aaagcatggcagccaggaagagatcaaggacaacattccctggaagggcgtgcccccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaagcatggcagccaggaagagatcaaggacaacattccctggaagggcgtgcccccact 257
Query: 361 ggcctccatctctaactcggccccatttccttctttctgcacttctccattgattg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ggcctccatctctaactcggccccatttccttctttctgcacttctccattgattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
