Query= MSMg01no359_e22.b1 MSMg01no359_e22.b1 CHROMAT_FILE:
MSMg01no359_e22.b1 PHD_FILE: MSMg01no359_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:46 2005
(342 letters)
>mm_chr8_6206900_6207641
Length = 742
Score = 607 bits (314), Expect = e-178
Identities = 330/338 (97%), Gaps = 6/338 (1%)
Strand = Plus / Plus
Query: 5 gaattcttttctatgatatgtaattgaaaattttatattttatgctttattttaatttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttttctatgatatgtaattgaaaattttatattttatgctttattttaatttca 264
Query: 65 tgttataaaggataacattaataaatctaatcaaatcttaaagtagtattgtataaattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgttataaaggataacattaataaatctaatcaaatcttaaagtagtattgtataaattt 324
Query: 125 tgtataaaattttgaaatttctgggttactccattttacatatattctgtcatactttct 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtataaaattttgaaatttctggtttactccattttacatatattctgtcatactttct 384
Query: 185 aagtcatttttgggggagggatggaaaatagcaaaatctaccaaaaataaactacattaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtcatttttgggggagggatggaaaatagcaaaatctaccaaaaataaactacattaa 444
Query: 245 aataaatactcatatttgagagcaaaagagtttcatgcaatcgtatatgtatgtatgtat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aataaatactcatatttgagagcaaaagagtttcatgcaatcgtatatgtatgtatgt-- 502
Query: 305 gtgtgtgtatgtatgtatatatat--gtatatatatat 340
||||||||| |||||||||||| ||||||||||||
Sbjct: 503 --gtgtgtatgcatgtatatatatatgtatatatatat 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_e22.g1 MSMg01no359_e22.g1 CHROMAT_FILE:
MSMg01no359_e22.g1 PHD_FILE: MSMg01no359_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:46 2005
(425 letters)
>mm_chr8_6348881_6349705
Length = 825
Score = 775 bits (401), Expect = 0.0
Identities = 419/425 (98%)
Strand = Plus / Minus
Query: 1 tctgtgacatacatggagggtgacttataaattataaataagtacaattttactcatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctgtgacatacatggagggtgacttataaattataaataagtacaattttactcatggt 566
Query: 61 cttggcatacttatctttaacaaaacatgaataaatgtgatacctatcttcccaaaggta 120
|||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 565 cttggcatacttatctttaacaaagcatgaataaacgtgatacctatcttcccaaaggta 506
Query: 121 aataaaccacaatatgaaaacaaaagtagctggctctcttacgtgagtaaaacctgattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aataaaccacaatatgaaaacaaaagtagctggctctcttacgtgagtaaaacctgattc 446
Query: 181 tccctagaattgctcccaaacttttgtcactgatgaccatggtgaccatggtgatctgac 240
||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct: 445 tccctagaattgctcccaaacttgtgtcactgatgaccacggtgaccgtggtgatctgac 386
Query: 241 actttctcactccattgggctttcttacatcacctccagcctgatagtcagtggtagtct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actttctcactccattgggctttcttacatcacctccagcctgatagtcagtggtagtcg 326
Query: 301 gaataacatgtcccaatggtatcagactcttgccatattcaattctgatttgactttatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaataacatgtcccaatggtatcagactcttgccatattcaattctgatttgactttatg 266
Query: 361 cgtgatcactatgatatcattctctaagttagccttctctctttttctgtaaaaaattgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgtgatcactatgatatcattctctaagttagccttctctctttttctgtaaaaaattgc 206
Query: 421 tctgg 425
|||||
Sbjct: 205 tctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
