MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-359O15
Chromosome	8 (Build37)
Map Location	29,125,095 - 29,125,476
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Erlin2, Prosc, Gpr124, Brf2, Rab11fip1, Got1l1, Adrb3, Eif4ebp1, LOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698
Downstream gene	EG666422, LOC666430, EG666446, LOC100042598, Unc5d
Link	Open Mouse BAC browser

Click to get alignment info.

name	Erlin2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244373 MGI:2387215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prosc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114863 MGI:1891207
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Gpr124 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78560 MGI:1925810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66653 MGI:1913903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab11fip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75767 MGI:1923017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Got1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76615 MGI:1923865
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adrb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11556 MGI:87939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif4ebp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13685 MGI:103267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC732482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:732482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Tex24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:541463 MGI:1921539
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrnb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108043 MGI:106212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Chrna6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11440 MGI:106213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921537P18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70952 MGI:1918202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1698 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382003 MGI:2686544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666422 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666422 MGI:3645752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 14 Proteins pseudo : _no_value

name	LOC666430 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins pseudo : _no_value

name	EG666446 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666446 MGI:3645532
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100042598 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042598
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Unc5d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210801 MGI:2389364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Erlin2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956395 GeneID:244373 MGI:2387215
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ER lipid raft associated 2 transcript_id : NM_153592.1

name	Prosc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119829185 GeneID:114863 MGI:1891207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline synthetase co-transcribed transcript_id : NM_054057.4

name	Prosc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119829188 GeneID:114863 MGI:1891207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline synthetase co-transcribed transcript_id : NM_001039077.2

name	Prosc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119829189 GeneID:114863 MGI:1891207
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proline synthetase co-transcribed transcript_id : NM_001039078.2

name	Gpr124 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16905078 GeneID:78560 MGI:1925810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 124 transcript_id : NM_054044.1

name	Brf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347833 GeneID:66653 MGI:1913903
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like transcript_id : NM_025686.2

name	Rab11fip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249096 GeneID:75767 MGI:1923017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB11 family interacting protein 1 (class I) transcript_id : NM_001080813.1

name	Got1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037452 GeneID:76615 MGI:1923865
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamic-oxaloacetic transaminase 1-like 1 transcript_id : NM_029674.1

name	Adrb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891719 GeneID:11556 MGI:87939
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, beta 3 transcript_id : NM_013462.3

name	Eif4ebp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:122937367 GeneID:13685 MGI:103267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4E binding protein 1 transcript_id : NM_007918.3

name	Tex24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61888893 GeneID:541463 MGI:1921539
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis expressed gene 24 transcript_id : NM_001013609.1

name	Chrnb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801755 GeneID:108043 MGI:106212
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, beta polypeptide 3 transcript_id : NM_173212.2

name	Chrnb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381612 GeneID:108043 MGI:106212
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, beta polypeptide 3 transcript_id : NM_027454.2

name	Chrna6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542394 GeneID:11440 MGI:106213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, nicotinic, alpha polypeptide 6 transcript_id : NM_021369.2

name	4921537P18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374195 GeneID:70952 MGI:1918202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921537P18 gene transcript_id : NM_026256.2

name	Gm1698 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85701996 GeneID:382003 MGI:2686544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1698, (NCBI) transcript_id : NM_001033467.1

name	LOC100042598 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258572 GeneID:100042598
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042598 transcript_id : XM_001478589.1

name	Unc5d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359035 GeneID:210801 MGI:2389364
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : unc-5 homolog D (C. elegans) transcript_id : NM_153135.2

name	Erlin2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956396 CCDS:CCDS22209.1 GeneID:244373 MGI:2387215
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : SPFH domain family, member 2 protein_id : NP_705820.1

name	Prosc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16930823 GeneID:114863 MGI:1891207
definition	codon_start : 1 note : isoform a is encoded by transcript variant 1 product : proline synthetase co-transcribed isoform a protein_id : NP_473398.1

name	Prosc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872182 GeneID:114863 MGI:1891207
definition	codon_start : 1 note : isoform b is encoded by transcript variant 2 product : proline synthetase co-transcribed isoform b protein_id : NP_001034166.1

name	Prosc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84872187 GeneID:114863 MGI:1891207
definition	codon_start : 1 note : isoform c is encoded by transcript variant 3 product : proline synthetase co-transcribed isoform c protein_id : NP_001034167.1

name	Gpr124 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905079 CCDS:CCDS22210.1 GeneID:78560 MGI:1925810
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 124 protein_id : NP_473385.1

name	Brf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076877 CCDS:CCDS22211.1 GeneID:66653 MGI:1913903
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA]; GO:0003743 - translation initiation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006352 - transcription initiation [Evidence IEA] codon_start : 1 product : RNA polymerase III transcription initiation factor BRF2 protein_id : NP_079962.1

name	Rab11fip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249097 GeneID:75767 MGI:1923017
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Rab coupling protein product : RAB11 family interacting protein 1 protein_id : NP_001074282.1

name	Got1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037453 CCDS:CCDS22212.1 GeneID:76615 MGI:1923865
definition	GO_function : GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006520 - amino acid metabolism [Evidence IEA]; GO:0009058 - biosynthesis [Evidence IEA] codon_start : 1 product : glutamic-oxaloacetic transaminase 1-like 1 protein_id : NP_083950.1

name	Adrb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85861166 CCDS:CCDS22213.1 GeneID:11556 MGI:87939
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0043235 - receptor complex [Evidence ISS] GO_function : GO:0031699 - beta-3 adrenergic receptor binding [Evidence IDA]; GO:0004939 - beta-adrenergic receptor activity [Evidence IEA]; GO:0015052 - beta3-adrenergic receptor activity [Evidence ISS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0051380 - norepinephrine binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence ISS]; GO:0050873 - brown fat cell differentiation [Evidence IGI]; GO:0002024 - diet induced thermogenesis [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IDA]; GO:0031649 - heat generation [Evidence IGI]; GO:0040015 - negative regulation of body size [Evidence IGI]; GO:0002025 - norepinephrine-epinephrine vasodilation during regulation of blood pressure [Evidence IDA]; GO:0043410 - positive regulation of MAPKKK cascade [Evidence ISS]; GO:0009409 - response to cold [Evidence IGI]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : Beta-3 AR; beta 3-AR; Beta-3 adrenoceptor; beta3-adrenergic receptor product : adrenergic receptor, beta 3 protein_id : NP_038490.2

name	Eif4ebp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:122937368 CCDS:CCDS22214.1 GeneID:13685 MGI:103267
definition	GO_component : GO:0005737 - cytoplasm [Evidence IC] GO_function : GO:0008190 - eukaryotic initiation factor 4E binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0003743 - translation initiation factor activity [Evidence IEA]; GO:0030371 - translation repressor activity [Evidence TAS] GO_process : GO:0008286 - insulin receptor signaling pathway [Evidence IDA]; GO:0017148 - negative regulation of protein biosynthesis [Evidence IEA]; GO:0045947 - negative regulation of translational initiation [Evidence IDA]; GO:0006417 - regulation of protein biosynthesis [Evidence IEA]; GO:0006445 - regulation of translation [Evidence IEA]; GO:0006446 - regulation of translational initiation [Evidence TAS] codon_start : 1 product : eukaryotic translation initiation factor 4E binding protein 1 protein_id : NP_031944.3

name	Tex24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61888894 CCDS:CCDS22215.1 GeneID:541463 MGI:1921539
definition	codon_start : 1 note : testis-specific protein product : testis-specific factor 1 protein_id : NP_001013627.1

name	Chrnb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532980 CCDS:CCDS22217.1 GeneID:108043 MGI:106212
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007271 - synaptic transmission, cholinergic [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : cholinergic receptor, nicotinic, beta polypeptide 3 isoform 1 protein_id : NP_775304.1

name	Chrnb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532978 CCDS:CCDS22216.1 GeneID:108043 MGI:106212
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007271 - synaptic transmission, cholinergic [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : cholinergic receptor, nicotinic, beta polypeptide 3 isoform 2 protein_id : NP_081730.1

name	Chrna6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542395 GeneID:11440 MGI:106213
definition	GO_component : GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007271 - synaptic transmission, cholinergic [Evidence IEA] codon_start : 1 note : nicotinic acetylcholine receptor subunit alpha 6; acetylcholine receptor alpha 6 neural; alpha6 nAChR product : cholinergic receptor, nicotinic, alpha polypeptide 6 protein_id : NP_067344.2

name	4921537P18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229050 GeneID:70952 MGI:1918202
definition	codon_start : 1 product : hypothetical protein LOC70952 protein_id : NP_080532.1

name	Gm1698 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701997 GeneID:382003 MGI:2686544
definition	codon_start : 1 product : hypothetical protein LOC382003 protein_id : NP_001028639.1

name	LOC100042598 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258573 GeneID:100042598
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478639.1

name	Unc5d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346575 GeneID:210801 MGI:2389364
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND]; GO:0007275 - development [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : unc5 homolog (C. elegans) 4 product : netrin receptor Unc5h4 protein_id : NP_694775.1

name	EG666446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666446
definition	number : 1 pseudo : _no_value

name	EG666446 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666446
definition	number : 2 pseudo : _no_value

name	LOC732482 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:110835698 GeneID:732482
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fam58a pseudogene pseudo : _no_value transcript_id : NR_003107.1

name	EG666422 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94383198 GeneID:666422 MGI:3645752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 ESTs, 14 Proteins product : predicted gene, EG666422 pseudo : _no_value transcript_id : XR_001871.1

name	LOC666430 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149258571 GeneID:666430
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_033765.1

clone name	MSMg01-110G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316A15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-462B10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-476G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-494J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302L23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-536A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238F24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-359O15.T7 (MSMg01no359_o15.b1)	MSMg01-359O15.TJ (MSMg01no359_o15.g1)
ACC	AG469215	AG469216
length	777	807
length of high quality (start - end)	383 (48 - 430)	71 (55 - 125)
definition	CHROMAT_FILE: MSMg01no359_o15.b1 PHD_FILE: MSMg01no359_o15.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:54:31 2005	CHROMAT_FILE: MSMg01no359_o15.g1 PHD_FILE: MSMg01no359_o15.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:54:31 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TACGACTCACTTTTCGGAGAGGATCCGCGGAATTCTCCTATTTCCCAATT TACTGTATTCCCCTTTTCCCTGGTGTGGGAGTGTATAAGTGTATTTGTAA TTATAAATGCCATATTAACAAGTATATATCCAGGGGGAGAGAACTATTTT GACCATGAATTAATGAAAACCAAATCCTCTGTATATTATGTGTGTATGCT AAGTGGAAGGATATTATACAAACTGGCTTTTGATGCTGTAATTTCCATGA TATTTTATTTCTCTGCACAAAAGCTTTTGCATGTTACCTAAATAGATGCT TACTAGGCTAACTCGAACTTAAAGTATATTCTTCCCAGGAACACAAATTC AAAAGAAGTGTCCCTAGCCAATTTGGCACTCCTGACATGGAAGAATTAAC ACAGATGTAAGGCTAGATGGAAGATGGTAACATAGACAACAGGTTGGCAA GAATTCTGTGTAGAATCAGAGTAAGTATTGCAGTGGTTGGGGAAATGGAA TGCGTTAGATGCCCGCCATCCCTTCTTTTTTTATTCTTCTTATCTTCCCC ACTTTTTCCCCTCCCCTGCCTTTTTCTTTCCCCTTTTTAATTCCCTTTCT CCTTCCCCCTTTTCTTCCCCCTTTTTTTTTCTTCTTTCCGCCCTTTTTTC TTCTCTCCCTTTATCCCTATTATCCTTATTATTTTTTTCCCTCTTCCCCT TATTTTTCATTTTTTCCCCTTTTTTCTCTTCTTACCCCTTTTTACTACTT CTTTCTTTTTGTCTAATATTACCAAAT	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXATGAATACTTCCAAGGCCATTAAAACTATTTAAAATGACTACGGAA TGAAGGTGGGAGGGTGGGGGTGCTTCTCCCTTCTCTCNCTCCCCCCTTTT CTTTCCTCTCCCTCTTCCCTTTCTCTTTTTCCTCTTCCCCCCCCCCTCCC TTCTTTTCTTTTTTTTCTTCCTTCCTTTCTCCCCTTTTTTTCTTTCCCCC CTTCCGTCCCCTTTTTTTCTTTCCTTTCCCTTTTTCTTTTCTCCCTCTCT TTTCCTTTTCTCCCTCCCTTTTATCCCCCTCCCCCTTTCCCTTTTTTTTT TCCCTTTCCCCTCTTTTTCCCCCCTTTTTTTTTTTTTTTTCTCTTTCCCC CCCCTTTTTTTCCTCTCCTTTTTTTTCCTTCCCCCCTCTTTTTTTCTTTT TCCGTTCCCCCCTCTCCTTCCCTTTTTCTCCCTCTATTCTCTCCTTTTAT TCTTCCTCTTTTTTTTTACTCCCTTTCCCTCTTTTCTCCCCCTTCCTTTT CCCCCTCCCCTTTCCTTCTTCTTTTCCCCCCCCCCTTTTTCCCCCCCCCC TTTTTTTCTTTTCTTCTCTTCTTTCTTTTTTTCTCCCCCTTTTTTTTCTT TTCTTTCCCCCCCGCCCCTTCCCTTTTTCCCACTTCTCTCTTCCTTTCCC CCCCTACCCCCCTTCCCTCTCCCCATCCCTTCATTCTTCCCTTTTTCCTT CCCTCCTCTCCCCCTCCCCACCTTTTTCCCCCCCCTTTCCCTCTTTTCCC CCTTTTT
quality values	Open. Hide. 6 6 8 7 9 13 10 6 6 8 6 9 9 9 9 10 10 11 11 11 17 17 18 17 18 20 30 34 39 23 17 17 28 23 25 41 33 33 20 18 14 19 15 15 11 11 11 18 21 36 37 33 28 33 42 48 48 59 59 59 59 59 59 59 59 59 59 59 59 57 53 50 50 50 53 53 68 68 53 53 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 59 59 59 59 57 68 68 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 57 57 54 57 57 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 68 50 50 50 50 50 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 44 44 43 43 43 43 43 27 18 24 27 27 59 59 59 68 68 59 59 59 59 59 59 57 57 57 52 52 52 57 57 57 57 57 57 59 59 59 57 57 57 57 57 57 57 57 57 57 57 54 54 54 57 57 57 52 52 52 52 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 54 57 57 57 59 59 59 59 44 37 28 36 42 47 47 46 44 39 39 37 37 41 41 41 26 15 15 15 15 21 12 11 11 19 19 30 44 44 43 37 37 32 39 32 35 35 35 35 35 42 39 39 39 30 29 29 29 24 18 19 19 28 24 21 18 13 12 19 19 21 23 22 22 18 14 14 15 23 20 20 22 22 25 25 19 19 10 10 12 23 16 18 18 12 15 28 28 28 19 13 13 15 15 15 12 12 14 21 30 37 37 33 21 16 15 10 10 12 19 22 17 18 14 19 8 8 10 10 8 9 15 16 16 9 9 8 8 8 8 8 8 11 15 12 14 14 15 16 19 10 10 10 8 9 9 9 16 24 28 20 18 9 13 8 8 8 8 8 8 10 10 8 8 8 8 8 8 9 9 7 8 6 6 8 8 11 20 19 12 11 12 12 10 10 10 10 10 10 12 15 11 12 12 19 11 14 15 21 19 12 12 13 12 19 11 11 11 22 20 12 12 8 8 8 10 10 10 9 8 8 8 10 8 8 6 10 11 11 16 11 11 11 15 10 6 6 6 7 17 22 14 13 13 13 15 14 24 32 28 15 10 8 8 8 8 8 10 10 12 13 9 9 9 15 17 17 16 15 12 16 11 11 11 11 11 15 27 24 16 12 11 10 11 10 12 10 10 10 10 10 6 6 6 6 10 10 23 12 12 12 8 8 8 8 8 8 9 8 15 16 20 15 12 8 6 8 6 6 6 8 8 8 8 8 9 8 8 8 8 8 10 10 20 19 30 30 21 17 15 12 13 16 18 16 13 12 10 12 12 12 12 14 12 12 6 6 6 6 9 9 9 15 10 8 8 10 8 8 10 11 8 10 7 6 10 8 8 8 8 8 17 8 8 8 8 8 9 8 8 10 10 10 13 11 11 8 8 8 8	Open. Hide. 18 19 27 27 32 41 34 23 18 11 11 11 17 11 24 26 28 28 22 22 22 22 29 37 32 32 39 23 23 22 33 31 31 33 33 33 33 30 30 23 25 25 24 24 26 37 44 44 33 33 33 33 33 33 33 36 36 48 48 57 57 50 50 37 37 32 32 34 37 48 50 50 50 50 54 59 59 57 57 57 57 68 68 59 59 59 59 48 43 43 43 57 57 57 57 57 48 48 48 48 48 48 48 47 47 42 39 39 39 47 48 48 48 48 46 46 46 41 43 22 15 8 8 8 8 9 9 10 8 10 8 8 8 8 8 8 3 0 3 10 8 10 14 13 9 9 9 17 13 19 15 21 19 26 22 19 10 11 11 13 12 11 11 18 22 21 19 19 10 8 6 6 6 6 8 8 8 8 21 10 12 12 12 12 14 14 10 19 19 33 37 43 36 31 21 16 12 9 9 9 8 13 14 22 19 19 19 19 20 24 16 21 24 19 13 8 9 9 8 8 8 8 8 10 10 10 8 8 8 8 9 14 32 23 18 16 16 12 10 8 8 8 8 10 10 14 19 14 12 12 10 10 10 13 11 9 8 8 8 11 11 11 11 8 9 9 9 11 10 8 8 8 10 11 11 24 14 11 11 8 8 8 9 12 12 14 15 16 15 24 16 17 15 9 15 9 9 9 15 15 11 9 12 12 11 11 14 17 17 18 19 18 10 9 9 9 9 9 11 18 13 11 10 10 10 10 8 8 8 8 9 9 16 19 30 24 19 11 9 9 9 9 19 23 26 23 12 11 10 9 11 8 8 8 15 10 10 10 10 10 8 8 8 8 15 10 8 8 8 8 10 10 9 11 11 13 15 15 10 10 9 10 17 19 15 9 9 9 8 8 8 8 8 8 7 7 9 21 14 14 15 10 10 9 9 9 10 10 15 17 15 15 10 8 12 8 8 6 6 8 8 8 8 8 11 11 11 11 13 15 19 13 9 8 8 8 6 6 8 8 8 8 8 10 10 11 12 12 19 13 10 10 6 7 7 15 8 8 10 8 8 8 8 10 15 24 26 29 20 14 13 13 13 14 13 22 10 10 10 17 17 9 8 8 6 6 6 8 8 10 11 8 9 9 10 15 15 14 14 11 12 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 9 9 9 8 8 8 8 12 14 28 14 15 13 10 10 8 15 8 10 10 14 16 19 30 23 18 18 19 19 28 24 15 10 11 11 16 16 19 21 19 16 13 13 11 11 18 13 16 10 14 9 8 8 8 10 8 9 16 12 10 10 11 14 12 15 11 9 9 10 9 9 8 14 10 10 8 9 8 8 8 11 11 14 14 12 12 17 24 22 19 22 11 11 12 15 16 11 9 8 8 8 8 8 8 8 8 12 8 10 10 17 19 19 19 14 11 11 11 11 12 15 12 9 11 8 8 8 9 9 15 17 19 19 11 13 10 10 8 8 10 10 10 12 13 7 15 6 6 6 8 13 9 10 9 9 9 16 16 28 24 20 16 12 9 9 9 9 8 8 8 8 8 15 15 17 8 10 10 10 10 10 10 10 12 11 13 11 11 9 9 9 13 14 15 15 8 8 8 8 8 10 11 8 8 8 10 11 8 8 8 9 12 8 8 10 8 8 8 9 8 11 19 19 13 20 32 32 30 17 16 10 10 10 13 10 11 11 14 10 12 15 8 8 10 15 14 9 9 12 17 16 15 8 7 7 8 8 8 18 13 15 15 18 21 25 14 16 19 15 9 9 9 10 12 12 12 14 20 16 21 10 10 10 8 8 8 10 8 8 10 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no359_o15.b1 MSMg01no359_o15.b1 CHROMAT_FILE:
MSMg01no359_o15.b1 PHD_FILE: MSMg01no359_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:31 2005
         (383 letters)



>mm_chr8_29124894_29125676
          Length = 783

 Score =  679 bits (351), Expect = 0.0
 Identities = 375/383 (97%), Gaps = 1/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttactgtattccccttttccctggtgtgggagtgtataagtgtatttgtaattataaa 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 atttactgtattccctttttccctggtgtgggagtgtataagtgtatttgtaattataaa 261

                                                                       
Query: 61  tgccatattaacaagtatatatccagggggagagaactattttgaccatgaattaatgaa 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 262 tgccatattaacaagtatatatccagggggagagaactattt-gaccatgaattaatgaa 320

                                                                       
Query: 121 aaccaaatcctctgtatattatgtgtgtatgctaagtggaaggatattatacaaactggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaccaaatcctctgtatattatgtgtgtatgctaagtggaaggatattatacaaactggc 380

                                                                       
Query: 181 ttttgatgctgtaatttccatgatattttatttctctgcacaaaagcttttgcatgttac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgatgctgtaatttccatgatattttatttctctgcacaaaagcttttgcatgttac 440

                                                                       
Query: 241 ctaaatagatgcttactaggctaactcgaacttaaagtatattcttcccaggaacacaaa 300
           |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||
Sbjct: 441 ctaaatagatgcttactaagctaactcaaacttaaagtatattcttcccaggaacataaa 500

                                                                       
Query: 301 ttcaaaagaagtgtccctagccaatttggcactcctgacatggaagaattaacacagatg 360
           ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 ttcaaaagaagtgtccctacccaatttggcactcctgacatggaagaattaagacagatg 560

                                  
Query: 361 taaggctagatggaagatggtaa 383
           ||||||| |||||||||||||||
Sbjct: 561 taaggctggatggaagatggtaa 583


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space:   289476
Effective search space used:   289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information