CTXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAACTGACGAA
TATTATATGGCTGAGAAGCACATGAAGAAAATGTTCAACATCCTTAGTCA
TCAGGGAAATTCATATTTCATTCTTAATGCATATGAAACTCTCAAAAGAA
ATGCAAGTTTCAACTATTTTTCACAACACAGCACGCTTCTGCTCTCACGT
CATCTTTTTTTGTTTGTTTAACGTCTGCACACTAAAGAATACATGTGCCG
GGCGTGGTGGCACATGCCTTTAATCCCAGCAGAGGAAGAGGCAGAGGAAG
GTGGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGAATGAGTTCCAGGA
CAGCCAGGGCTACACAAAGAAACCCTGTCTCAAAAAAAAAAAAAAATACA
TGTAATGCTGGTGTTTCTATGCTTGGCTTGGTTTGTTCATCTATTCTCTT
GCAAACAACAAGGTCTCACTCCTCTTTATGGCTGATCAATTCTCTGTTGT
ACATCTATACATAACCATGGCTTGGTTATTGCGACTACCCCATCAATAAA
TGGTATCACATTGATCCCATATATTGAAGCCATATCTTTTGGACAAATAC
ACTTCCCACTTATTTTTAAACCACCTTGTCATCCTGCTCCATTTCCCCGA
AAAACAACCCCCCCCCCGTTCTTAATTTCTCCCCGGTTTATCTTCCCGCT
TTTACCTCTCTTTGTCTCAATCACCATTTTTCTTCCCCCCTTTTTCTCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCTTCGGTCATGCCTTCCAAAAAAATCCTAATGCTGAGGTGGATA
AGTGGACATCTGTAAATGGAAGCTAGGGAGATAGTTCAGCTGCTAAGAGC
ACTGGTAGAGGACCGCACTTCCCTCCCCAGGACCCACATAGTGGATTACC
ACTAACTGTAACTACAGTTCTAAAAATTCTGAACCTTCTTCTGGCCTCCT
TGAACACCAGGCATGCATATAATATACTTACATACATGCATACACTCTCA
CATACACATAAAATAAATGAAAAAATGTGGATGAATTTCTTTTCAAAGAG
TCTTTTTTTATGCAGCTATGACAGAATCCTTGAGACTGGGTAAGTTACAG
AGAACAGAAGTTTTCATCTCACAGTTTCTAGAGGTATGAATGGGAGAGGA
GGGAGGTCATGATTTACATATACCGTTTTCTCCCCCCGTTTTTATCCCTA
TTCTTTTCACCCTTTATTCCGTCTTTTTTTCCTTCTTTTTCTCCCCTTCT
TTTTTTTTTTTTATACTCCGCTTCTCCTTTTGTTCCTTGTCTCTTTTTTC
CCTTGGTTTTTTCCCCTGTCCTTTCCTCTCCTCCCTCTTCTTCTATTTTT
CTTATCTTCCCCCCTCCCTTACTTTTTATTTTGCCTATCTCCATTCCCCC
CTTTTTCCTTCTCTTATCCCTTTCCCTTTTCATTTACCCCCCCA

Query= MSMg01no359_p05.b1 MSMg01no359_p05.b1 CHROMAT_FILE:
MSMg01no359_p05.b1 PHD_FILE: MSMg01no359_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:33 2005
         (453 letters)



>mm_chr8_8389569_8390421
          Length = 853

 Score =  779 bits (403), Expect = 0.0
 Identities = 444/465 (95%), Gaps = 16/465 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atattatatggctgagaagcacatgaagaaaatgttcaacatccttagtcatcagggaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 atattatatggctgagaagcacatgaagaaaatgttcaacatccttaatcatcagggaaa 260

                                                                       
Query: 61  ttcatatttcattcttaatgcatatgaaactctcaaaagaaatgcaagtttcaactattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcatatttcattcttaatgcatatgaaactctcaaaagaaatgcaagtttcaactattt 320

                                                                       
Query: 121 ttcacaacacagcacgcttctgctctcacgtcatctttttttgtttgtttaacgtctgca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcacaacacagcacgcttctgctctcacgtcatctttttttgtttgtttaacgtctgca 380

                                                                       
Query: 181 cactaaagaatacatgtgccgggcgtggtggcacatgcctttaatcccagca---gagga 237
           |||||||||||||||||||||||||||||||| |||||||||||||||||||   | |||
Sbjct: 381 cactaaagaatacatgtgccgggcgtggtggcgcatgcctttaatcccagcactcg-gga 439

                                                                       
Query: 238 agaggcagaggaaggtggatttctgagttcaaggccagcctggtctacagaatgagttcc 297
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ---ggcagaggaaggtggatttctgagttcaaggccagcctggtctacagaatgagttcc 496

                                                                       
Query: 298 aggacagccagggctacacaaagaaaccctgtctc-aaaaaaaaaaaaaaa--------t 348
           |||||||||||||||||||| |||||||||||||| |||||||||||||||        |
Sbjct: 497 aggacagccagggctacacagagaaaccctgtctcgaaaaaaaaaaaaaaaaaaaagaat 556

                                                                       
Query: 349 acatgtaatgctggtgtttctatgcttggcttggtttgttcatctattctcttgcaaaca 408
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 acatgtaatgctggtgtttctatgcttggcttggtttgttcatctattctcttgcaaaca 616

                                                        
Query: 409 acaaggtctcactcctctttatggctgatcaattctctgttgtac 453
           |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 617 acaaggtctcactcttctttatgactgatcaattctctgttgtac 661


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space:   373449
Effective search space used:   373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)